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This is the reference documentation for C3.ai COVID-19 HTTP RESTful API. The API request and responses are in JSON.
Please contribute your questions, answers and insights to the C3.ai COVID-19 Grand Challenge community.
For support, please send email to: covid@c3.ai.
If any publications or research results are derived in full or in part from the C3.ai COVID-19 Data Lake, please make sure to credit the C3.ai COVID-19 Data Lake by referencing the case study at https://c3.ai/customers/covid-19-data-lake/.
Get started using the C3.ai COVID-19 Data Lake with R and Python notebooks. Use the online notebooks to easily try out the C3.ai COVID-19 Data Lake APIs in the cloud without any downloads or local environment setup. Use the downloadable notebooks to edit the code and save your results locally.
The R Quickstart notebook shows simple API calls and the breadth of data available in the C3.ai COVID-19 Data Lake.
To try out the C3.ai COVID-19 Data Lake without any downloads or local environment setup, run the R Notebook in your browser using Binder:
To edit the notebook and save your results locally, follow these steps.
Ensure that the following are installed on your computer:
While opening the R notebook (.Rmd file), if you see the error:
Unable to locate R binary by scanning standard locations.
then you probably did not install R from CRAN. Make sure you install both R Studio and R from CRAN.
The Python Quickstart notebook shows simple API calls and the breadth of data available in the C3.ai COVID-19 Data Lake.
To try out the C3.ai COVID-19 Data Lake without any downloads or local environment setup, run the Python Jupyter Notebook in your browser using Binder:
To edit the notebook and save your results locally, follow these steps.
Ensure that the following are installed on your computer:
Ensure that you have Python 3 and not Python 2.7.
While opening the Jupyter Notebook, if you see the error:
"Error loading notebook: An unknown error occurred while loading this
notebook. This version can load notebook formats or earlier. See the
server log for details.
then you can probably resolve this by installing Python from Anaconda.
If you see error messages regarding pandas
functions such as json_normalize
or explode
, make sure that you are using a pandas
version of at least 1.0.0. See the pandas installation guide for installation instructions.
The R and Python Deep Dive notebooks explore datasets in mobility and case counts, and provide a starting point for detailed analysis into the relationships between these datasets.
Run the Deep Dive notebook in your browser using Binder:
To edit the Deep Dive notebook and save your results locally, download the zip file containing R Notebooks and library functions. For additional details, see the R Quickstart section.
Run the Deep Dive notebook in your browser using Binder:
To edit the Deep Dive notebook and save your results locally, download the zip file containing Python Notebooks and library functions. For additional details, see the Python Quickstart section.
The Python Deep Dive notebook explores datasets in disease spread, state-level clinical data, and demographics data and provides a starting point for detailed analysis into the relationships between these datasets.
Run the Deep Dive notebook in your browser using Binder:
To edit the Deep Dive notebook and save your results locally, download the zip file containing Python Notebooks and library functions. For additional details, see the Python Quickstart section.
The R Deep Dive notebook explores economic indicator datasets and provides a starting point for detailed analysis into the economic impacts of the pandemic.
Run the Deep Dive notebook in your browser using Binder:
To edit the Deep Dive notebook and save your results locally, download the zip file containing R Notebooks and library functions. For additional details, see the R Quickstart section.
What's new:
What's new:
Policy
Type to LocationPolicySummary for clarity. Query via Policy
Type is deprecated but still supported.What's new:
What's new:
What's new:
Using these APIs, you can pull together data from multiple COVID-19 data sources with a single API call. This is made possible by using C3.ai Types.
If you are new to the concept of a C3.ai Type, then it is easier to think of a C3.ai Type as an entity that holds the data. Using C3.ai Types makes it possible to programmatically interact with a unified, federated image of COVID-19 data.
On this page, entries such as OutbreakLocation, LineListRecord are the names of C3.ai Types. Each C3.ai Type holds data of a certain kind. For example:
While each such C3.ai Type holds the data of a particular kind, you can use these APIs to connect up the data from multiple C3.ai Types. For example, you can join the data from two C3.ai Types, BiologicalAsset and Sequence. This can be accomplished by using the include
option in the fetch API call.
The following is an example entity relationship diagram showing how C3.ai Types are connected. Not all fields are shown in the below diagram. Refer to the Fields table for a C3.ai Type for a full listing of the fields for that C3.ai Type. See, for example, LineListRecord.
The include
parameter is a powerful way to fetch data from multiple C3.ai Types. This parameter can also be used to fetch specific fields from a single C3.ai Type.
When you want to join data from two C3.ai Types, you make a fetch API call to one C3.ai Type, and use include
in your request body to refer to the second C3.ai Type. The returned objects will contain fields and data from both the C3.ai Types.
See the section Using Include for detailed examples showing how to use include
to combine data from multiple C3.ai Types.
The following APIs are currently suppported:
fetch
(for all C3.ai Types presented here)evalmetrics
(for OutbreakLocation)getprojectionhistory
(for OutbreakLocation)getarticlemetadata
(for BiblioEntry)getimageurls
(for Diagnosis)allversionsforpolicy
(for LocationPolicySummary)Use POST
requests to access these APIs.
NOTE: If you are new to the concept of RESTful API, this Postman Learning Center is a good place to start. All APIs described in this documentation can be verified using the Postman client.
The following table shows the APIs available for specific data sources (more data sources are being added):
All C3.ai APIs described in this documentation must be accessed using POST
requests.
If you receive the following error:
{
"message": "Missing Authentication Token"
}
then you are probably using GET
or another request, and you should instead use POST
. No authentication token is required to access the APIs.
All C3.ai APIs described in this documentation must be used with the following header settings:
Headers | Setting |
---|---|
Accept | application/json |
Content-Type | application/json |
The request JSON for the fetch
API should be used with the filter
key. This filter
key can be used in the fetch call to select any combination of the fields in the data. A few examples follow:
IMPORTANT: For a list of fields available for a C3.ai Type, refer to the fields section of that C3.ai Type in this document.
To fetch the data that match the specific values of the id
field of the data:
{
"spec" : {"filter": 'id == "Afghanistan"'}
}
A few other examples:
{
"spec" : {"filter": 'id == "Afghanistan" && age == 45'}
}
or,
{ // See BiologicalAsset
"spec": {
"filter": "isolationSource == 'feces' && location == 'Japan'",
"limit": -1
}
}
or, using a "contains(field, "string")"
format:
{ // See LineListRecord
"spec": {
"filter": "gender == 'male' && lineListSource == 'OPEN' && age <= 20 && contains(relevantTravelHistoryLocation,'Wuhan')"
}
}
The fetch
API returns two main kinds of information in its response:
fetch
API call.For full details on request and response JSON, see the several examples provided in the fetch
API for all the C3.ai Types in this documentation.
In a C3.ai Type, the data type of a field can be a C3.ai Type. For example, the field links
in TherapeuticAsset is of the type ExternalLink. This is how these two C3.ai Types are connected.
For example, to join data from these two connected C3.ai Types, TherapeuticAsset and ExternalLink, use the include
parameter as follows:
fetch
API call to TherapeuticAsset.links
in TherapeuticAsset is of ExternalLink Type. Using the dot notation on the links
field, you can access any field in the ExternalLink. For example, specifying links.url
will resolve into ExternalLink.url
, which will obtain the url
field data from the ExternalLink. HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"include": "productType, description, origin, links.url",
"filter": "origin =='Milken'",
"limit" : 3
}
}
Response JSON:
{
"objs": [
{
"productType": "TAK-888, antibodies from recovered COVID-19 patients",
"origin": "Milken",
"links": [
{
"url": "https://www.wsj.com/articles/drugmaker-takeda-is-working-on-coronavirus-drug-11583301660?mod=article_inline",
"therapeuticAsset": {
"id": "milkentreatment_001"
},
"id": "1919184b-460e-4725-8c2c-0ab225a58c1c",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://phrma.org/coronavirus",
"therapeuticAsset": {
"id": "milkentreatment_001"
},
"id": "fdc646d7-eada-47af-b782-89216996b7ec",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
}
],
"id": "milkentreatment_001",
"meta": {
"fetchInclude": "[productType,description,origin,{links:[id,url]},id,version]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "Antibodies from mice, REGN3048-3051, against the spike protein",
"origin": "Milken",
"links": [
{
"url": "https://www.statnews.com/2020/03/19/an-updated-guide-to-the-coronavirus-drugs-and-vaccines-in-development/",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "154217eb-08fc-4ba8-aeb2-6ac8d93710a1",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://www.bnnbloomberg.ca/gilead-s-drug-leads-global-race-to-find-coronavirus-treatment-1.1395231",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "2984da95-4e96-4e27-9365-0b17ee04c091",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://uk.reuters.com/article/uk-china-health-treatments-factbox/factbox-global-efforts-to-develop-vaccines-drugs-to-fight-the-coronavirus-idUKKBN20D2MD?rpc=401&",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "61d19389-fe0b-4e7a-84dc-07dbca2d20c3",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://www.marketwatch.com/story/these-nine-companies-are-working-on-coronavirus-treatments-or-vaccines-heres-where-things-stand-2020-03-06",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "812e1849-5403-4940-8d46-0d372dc94bbd",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://www.fiercebiotech.com/research/fast-moving-regeneron-eyes-summer-clinical-trial-for-covid-19-antibody-cocktail-therapy",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "b583ddb9-68e3-4896-b8b8-bb4d283c5b79",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"url": "https://www.fiercepharma.com/pharma/regeneron-s-r-d-war-room-sleepless-nights-and-esprit-de-corps-hunt-for-covid-19-therapy?mkt_tok=eyJpIjoiTUROaFpUYzJOVE14TjJNMSIsInQiOiJRT0YxZVBYWHJQQVlNYzFcL3JUSUdac1Zqa0VXMGk2MHpQS3kxZXdmaWhyQlJ2MWFuR1wvb0FGb1pDWExGQ0pYQzYrN1dGMW9BRlFMUlo2WE1XOVZQN2pxaE1MUUFQSHFlYlVCc0xKdmJoTm1xdHdcL0hPeXJKS0llODJTTGR5aHZjQ2Z3ZE1KU1BFZ013R0JyeU9qTkxSZmc9PSJ9&mrkid=72869502",
"therapeuticAsset": {
"id": "milkentreatment_002"
},
"id": "f09ff2a3-2ca0-48cd-b373-6bd0a396d221",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
}
],
"id": "milkentreatment_002",
"meta": {
"fetchInclude": "[productType,description,origin,{links:[id,url]},id,version]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "Antibodies from recovered COVID-19 patients",
"origin": "Milken",
"links": [
{
"url": "http://www.koreaherald.com/view.php?ud=20200312000885",
"therapeuticAsset": {
"id": "milkentreatment_003"
},
"id": "d2073283-ec4f-4f5f-821a-8cb6019ed80e",
"meta": {
"fetchInclude": "[id,url,therapeuticAsset,version]",
"fetchType": "ExternalLink"
},
"version": 1
}
],
"id": "milkentreatment_003",
"meta": {
"fetchInclude": "[productType,description,origin,{links:[id,url]},id,version]",
"fetchType": "TherapeuticAsset"
},
"version": 1
}
],
"count": 3,
"hasMore": true
}
In the following example, the include
parameter is used with this
keyword, which obtains all the fields from BiologicalAsset and the field sequence
from Sequence.
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"include": "this, sequence.sequence",
"filter": "exists(sequence.sequence)",
"limit" : 3
}
}
Response JSON:
{
"objs": [
{
"sequence": {
"sequence": "SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ",
"id": "5R7Y_A"
},
"assetType": "protein sequence",
"species": "Severe acute respiratory syndrome-related coronavirus",
"genus": "Betacoronavirus",
"family": "Coronaviridae",
"authors": "Fearon,D., Powell,A.J., Douangamath,A., Owen,C.D., Wild,C., Krojer,T., Lukacik,P., Strain-Damerell,C.M., Walsh,M.A., von Delft,F.",
"genBankTitle": "Chain A, main protease",
"id": "5R7Y_A",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-02T03:39:25Z",
"createdBy": "dataloader",
"updated": "2020-04-02T03:39:25Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-02T03:39:33Z",
"sourceFile": "proteins_sequence_metadata.csv",
"fetchInclude": "[this,{sequence:[sequence,id]}]",
"fetchType": "BiologicalAsset"
},
"version": 1
},
{
"sequence": {
"sequence": "SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ",
"id": "5R7Z_A"
},
"assetType": "protein sequence",
"species": "Severe acute respiratory syndrome-related coronavirus",
"genus": "Betacoronavirus",
"family": "Coronaviridae",
"authors": "Fearon,D., Powell,A.J., Douangamath,A., Owen,C.D., Wild,C., Krojer,T., Lukacik,P., Strain-Damerell,C.M., Walsh,M.A., von Delft,F.",
"genBankTitle": "Chain A, main protease",
"id": "5R7Z_A",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-02T03:39:25Z",
"createdBy": "dataloader",
"updated": "2020-04-02T03:39:25Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-02T03:39:33Z",
"sourceFile": "proteins_sequence_metadata.csv",
"fetchInclude": "[this,{sequence:[sequence,id]}]",
"fetchType": "BiologicalAsset"
},
"version": 1
},
{
"sequence": {
"sequence": "SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ",
"id": "5R80_A"
},
"assetType": "protein sequence",
"species": "Severe acute respiratory syndrome-related coronavirus",
"genus": "Betacoronavirus",
"family": "Coronaviridae",
"authors": "Fearon,D., Powell,A.J., Douangamath,A., Owen,C.D., Wild,C., Krojer,T., Lukacik,P., Strain-Damerell,C.M., Walsh,M.A., von Delft,F.",
"genBankTitle": "Chain A, main protease",
"id": "5R80_A",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-02T03:39:25Z",
"createdBy": "dataloader",
"updated": "2020-04-02T03:39:25Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-02T03:39:33Z",
"sourceFile": "proteins_sequence_metadata.csv",
"fetchInclude": "[this,{sequence:[sequence,id]}]",
"fetchType": "BiologicalAsset"
},
"version": 1
}
],
"count": 3,
"hasMore": true
}
Filter on dateTime
{
"spec" : {
"filter": "field >= dateTime('YYYY-MM-DD')"
}
}
// Example: Fetch BiologicalAssets with collectionData post March 10, 2020.
{
"spec" : {
"filter": "collectionDate >= dateTime('2020-03-10')"
}
}
Logical operators
// Note: Multiple filters can be applied with an "and" ("&&") or an "or" ("||") operator.
// Operator "and".
{
"spec" : {
"filter": "fieldA == 'stringA' && fieldB == 'stringB'"
}
}
// Example: Fetch BiologicalAssets with isolationSource 'feces' AND location 'Japan'.
{
"spec": {
"filter": "isolationSource == 'feces' && location == 'Japan'"
}
}
// Operator "or".
{
"spec" : {
"filter": "fieldA == 'stringA' || fieldB == 'stringB'"
}
}
// Example: Fetch BiologicalAssets with isolationSource 'feces' OR location 'Japan'.
{
"spec": {
"filter": "isolationSource == 'feces' || location == 'Japan'"
}
}
Filter on contains
, startsWith
, or endsWith
// Contains: Retrieve all entries, where the specified field contains matching characters.
// startsWith: Retrieve all entries, where the specified field starts with matching characters.
// endsWith: Retrieve all entries, where the specified field ends with matching characters.
{
"spec": {
"filter": "contains(field,'string') || startsWith(field, 'string') || endsWith(field, 'string')"
}
}
// Example: Fetch Biological Assets where genBankTitle contains "ORF10".
{
"spec": {
"filter": "contains(genBankTitle,'ORF10')"
}
}
Filter on empty
// Empty: Retrieve all entries, where the specified field is NULL.
{
"spec": {
"filter": "empty(field)"
}
}
//Example: Fetch LineListRecords without gender, age, or location data.
{
"spec": {
"filter": "empty(gender) && empty(age) && empty(location)"
}
}
Filter on exists
// Exists: Retrieve all entries where the specified fields exist.
{
"spec": {
"filter": "exists(field)"
}
}
//Example: Fetch LineListRecords with gender, age, or location data.
{
"spec": {
"filter": "exists(gender) && exists(age) && exists(symptoms)"
}
}
Filter on matchesRegex
// matchesRegex: Retrieve all entries where the specified field matches with the regex pattern.
{
"spec": {
"filter": "matchesRegex(field, 'regex_string')"
}
}
//Example: Fetch clinical data of patients whose COVID-19 test results are positive.
{
"spec": {
"filter": "matchesRegex(testResults, 'COVID[-]?19:[ ]?[Pp]ositive')"
}
}
Filter on lowerCase
// lowerCase: Retrieve all entries where the specified field's lowercase matches.
{
"spec": {
"filter": "lowerCase(field) == 'string'"
}
}
//Example: Fetch historical vaccination rates of >= 1 dose of Tdap vaccination for United States teenagers.
{
"spec": {
"filter": "contains(lowerCase(vaccineDetails), '>=1 dose tdap vaccination') && location == 'UnitedStates' && lowerCase(vaxView) == 'teenager'"
}
}
While the fetch
API returns the raw data, the evalmetrics
API returns time series data based on the metrics expression you provide. Metrics are instructions you can provide in the request JSON of the evalmetrics
API for how to transform the data into time series data. The evalmetrics
API will then return the resulting time series data.
The following fields are supported in the request JSON of the evalmetrics
API:
IMPORTANT: Limits apply to these fields. See Limits.
"ids": ["King_Washington_UnitedStates","SanDiego_California_UnitedStates"]
."expressions":["NYT_ConfirmedCases"]
. See the EvalMetrics section for a list of supported metrics."start":"2020-03-01"
and "end":"2020-03-30"
."interval":"DAY"
.IMPORTANT: Depending on the raw data , the available time ranges and frequencies of data vary across data sources. Please refer to the detailed metric documentation in the EvalMetrics section for each data source to set suitable time ranges and interval for your
evalmetrics
call.
The response JSON for the evalmetrics
API consists of the time series data array, the timestamp array, and an array consisting of the fraction of data missing from the time series.
The missing
array in the evalmetrics
response JSON can be useful to determine whether the requested time range lies partially outside the available range for a particular metric. Each value in this array corresponds to the percentage availability of data in a particular time interval in the timeseries requested. For example, 0
represents no data missing; 100
represents 100% data in the interval missing.
Note the following when using the evalmetrics
API:
evalmetrics
request body should be used with the spec
key, just as in a fetch
request.end
date field in the JSON request acts as an open interval. That is, if end
is set to “2020-04-04”, then only the data upto and including April 3rd is returned. If you need the data for April 4th, then you must set end
date to “2020-04-05".Refer to the several examples provided in the evalmetrics
API for OutbreakLocation for full details on response JSON.
If limit
is not specified in the request body, then by default 2000 rows, or less if the available data is less than 2000 rows, are returned. Most APIs return only a limited number of rows even if the limit
setting is higher or is -1. These maximum limits are shown in the table below.
Use the offset
parameter to fetch more rows. For example, see Example 6 for Python in LineListRecord.
API | Limit |
---|---|
BiblioEntry: /api/1/biblioentry/fetch |
2000 |
PopulationData: /api/1/populationdata/fetch |
2000 |
LaborDetail: /api/1/labordetail/fetch |
2000 |
LineListRecord: /api/1/linelistrecord/fetch |
5000 |
Sequence: /api/1/sequence/fetch |
8000 |
Subsequence: /api/1/subsequence/fetch |
8000 |
BiologicalAsset: /api/1/biologicalasset/fetch |
8000 |
Setting | Limit |
---|---|
start |
Start datetime of the time range must be no earlier than 50 years ago from the present day. For example: '1990-01-01'. |
end |
End datetime of the time range must be no earlier than the start datetime specified. |
interval |
DAY , MONTH , and YEAR are supported. |
ids |
The number of ids specified in this array must be less or equal to 10. |
expressions |
The number of expressions specified in this array must be less than or equal to 4. |
Setting | Limit |
---|---|
ids |
The number of ids specified in this array must be less than or equal to 10. |
OutbreakLocation stores location data such as countries, provinces, cities, where COVID-19 outbeaks are recorded.
The fetch
API provides tabular location data. The evalmetrics
API provides time series data, while the getprojectionhistory
API provides historical versioned projections of time series data.
OutbreakLocation IDs that should be used in the id
field (in the fetch
API) and ids
field (in the evalmetrics
API) are available for download in this Microsoft Excel document.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | The location ID of the country, state or province, and county to fetch for the COVID-19 outbeak. Should be used with the key filter , e.g., "filter": 'id == "Afghanistan"' . |
name | string | Actual name of the country, state or province, and county corresponding to the location ID. |
fips | string | FIPS code for the country, and for the county and county-equivalents in the United States. |
lineList | LineListRecord | List of C3.ai Type LineListRecord objects associated with the location. |
assets | BiologicalAsset | List of C3.ai Type BiologicalAsset objects associated with the location. |
diagnoses | Diagnosis | List of C3.ai Type Diagnosis objects associated with the location. |
hospitals | Hospital | List of C3.ai Type Hospital objects associated with the location. |
policy | LocationPolicySummary | List of C3.ai Type LocationPolicySummary objects associated with the location. |
populationData | PopulationData | List of C3.ai Type PopulationData objects associated with the location. |
laborDetail | LaborDetail | List of C3.ai Type LaborDetail objects associated with the location. |
vaccineCoverage | VaccineCoverage | List of C3.ai Type VaccineCoverage objects associated with the location. |
locationExposures | LocationExposure | List of C3.ai Type LocationExposure objects with this location as locationTarget . |
locationExposuresVisited | LocationExposure | List of C3.ai Type LocationExposure objects with this location as locationVisited . |
latestTotalPopulation | int | Most recent population of the location based on data from The World Bank or the US Census Bureau. Data available at county-level for locations in the United States and country-level globally. |
population2019 | int | Population of the location for the year 2019, based on data from the European Centre for Disease and Control. |
populationCDS | int | Population of the location, based on data from Corona Data Scraper. |
hospitalIcuBeds | int | Total number of hospital intensive care unit (ICU) beds. Available for locations in the United States. |
hospitalStaffedBeds | int | Total number of staffed hospital beds. Available for locations in the United States. |
hospitalLicensedBeds | int | Total number of licensed hospital beds. Available for locations in the United States. |
populationOfAllChildren | int | Most up-to-date total population of all sub-locations (e.g. for all counties in a state) based on available demographic data. Available for locations in the United States. |
latestLaborForce | int | Most up-to-date labor force population of the location based on available Bureau of Labor Statistics data. Available for county locations in the United States. |
latestEmployedPopulation | int | Most up-to-date employed population of the location based on available Bureau of Labor Statistics data. Available for county locations in the United States. |
latestUnemployedPopulation | int | Most up-to-date unemployed population of the location based on available Bureau of Labor Statistics data. Available for county locations in the United States. |
latestUnemploymentRate | double | Most up-to-date unemployment rate of the location based on available Bureau of Labor Statistics data, in percent. Available for county locations in the United States. |
laborForceOfAllChildren | int | Most up-to-date labor force population of all sub-locations (e.g. for all counties in a state) based on available Bureau of Labor Statistics data. Available for US state- and country-level locations. |
employedPopulationOfAllChildren | int | Most up-to-date employed population of all sub-locations (e.g. for all counties in a state) based on available Bureau of Labor Statistics data. Available for US state- and country-level locations. |
unemployedPopulationOfAllChildren | int | Most up-to-date unemployed population of all sub-locations (e.g. for all counties in a state) based on available Bureau of Labor Statistics data. Available for US state- and country-level locations. |
unemploymentRateOfAllChildren | double | Most up-to-date unemployment rate, in percent, over all sub-locations (e.g. for all counties in a state) based on available Bureau of Labor Statistics data. This value is unemployedPopulationOfAllChildren divided by laborForceOfAllChildren , in percent. Available for US state- and country-level locations. |
elementarySchoolCount | int | Total number of elementary schools. Available for locations in South Korea. |
kindergartenCount | int | Total number of kindergartens. Available for locations in South Korea. |
universityCount | int | Total number of universities. Available for locations in South Korea. |
nursingHomeCount | int | Total number of nursing homes. Available for locations in South Korea. |
elderlyPopulationRatio | double | Proportion of population that is elderly, as percent (0-100). Available for locations in South Korea. |
elderlyAloneRatio | double | Proportion of households that are elderly people living alone, as percent (0-100). Available for locations in South Korea. |
publicHealthCareCenterBeds | int | Total number of hospital beds available in public facilities. Available for locations in India. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/fetch
Request JSON:
{
"spec": {
"filter": "id == 'Germany'"
}
}
Response JSON:
{
"objs": [
{
"hospitalPrediction": {
"timestamp": "2019-01-01T00:00:00"
},
"locationType": "country",
"populationCDS": 83149300,
"location": {
"value": {
"id": "Germany"
},
"timestamp": "2020-05-13T00:00:00Z"
},
"fips": {
"id": "DE"
},
"population2018": 82927922,
"id": "Germany",
"name": "Germany",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-05T21:00:11Z",
"createdBy": "dataloader",
"updated": "2020-05-23T20:22:40Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-23T23:18:02Z",
"sourceFile": "CanonicalEuropeanCenterForDiseaseControl.csv",
"fetchInclude": "[]",
"fetchType": "OutbreakLocation"
},
"version": 3670029,
"typeIdent": "EP_LOC"
}
],
"count": 1,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/fetch
Request JSON:
{
"spec": {
"filter": "id == 'Beijing_China'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/fetch
Request JSON:
{
"spec": {
"filter": "id == 'SantaClara_California_UnitedStates'"
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
The following tables show the available time series metrics from each data source that can be evaluated using EvalMetrics. Use the expressions from the Metric column in the expressions
field of the request JSON of the evalmetrics
API. For example, "expressions":["JHU_ConfirmedDeaths"]
.
Please click on the arrows to expand examples and see request and response JSONs.
Daily case, death, and recovery counts available at:
Metric | Description |
---|---|
JHU_ConfirmedCases | Cumulative total confirmed cases. |
JHU_ConfirmedDeaths | Cumulative total confirmed deaths. |
JHU_ConfirmedRecoveries | Cumulative total confirmed recoveries. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["UnitedStates"],
"expressions":["JHU_ConfirmedCases"],
"interval":"DAY",
"start":"2020-01-01",
"end":"2020-03-30"
}
}
Response JSON:
{
"result": {
"UnitedStates": {
"JHU_ConfirmedCases": {
"type": "MaterializedTimeseriesDouble",
"count": 89,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
"2020-01-03T00:00:00",
"2020-01-04T00:00:00",
"2020-01-05T00:00:00",
"2020-01-06T00:00:00",
"2020-01-07T00:00:00",
"2020-01-08T00:00:00",
"2020-01-09T00:00:00",
"2020-01-10T00:00:00",
"2020-01-11T00:00:00",
"2020-01-12T00:00:00",
"2020-01-13T00:00:00",
"2020-01-14T00:00:00",
"2020-01-15T00:00:00",
"2020-01-16T00:00:00",
"2020-01-17T00:00:00",
"2020-01-18T00:00:00",
"2020-01-19T00:00:00",
"2020-01-20T00:00:00",
"2020-01-21T00:00:00",
"2020-01-22T00:00:00",
"2020-01-23T00:00:00",
"2020-01-24T00:00:00",
"2020-01-25T00:00:00",
"2020-01-26T00:00:00",
"2020-01-27T00:00:00",
"2020-01-28T00:00:00",
"2020-01-29T00:00:00",
"2020-01-30T00:00:00",
"2020-01-31T00:00:00",
"2020-02-01T00:00:00",
"2020-02-02T00:00:00",
"2020-02-03T00:00:00",
"2020-02-04T00:00:00",
"2020-02-05T00:00:00",
"2020-02-06T00:00:00",
"2020-02-07T00:00:00",
"2020-02-08T00:00:00",
"2020-02-09T00:00:00",
"2020-02-10T00:00:00",
"2020-02-11T00:00:00",
"2020-02-12T00:00:00",
"2020-02-13T00:00:00",
"2020-02-14T00:00:00",
"2020-02-15T00:00:00",
"2020-02-16T00:00:00",
"2020-02-17T00:00:00",
"2020-02-18T00:00:00",
"2020-02-19T00:00:00",
"2020-02-20T00:00:00",
"2020-02-21T00:00:00",
"2020-02-22T00:00:00",
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"2020-02-24T00:00:00",
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"2020-02-26T00:00:00",
"2020-02-27T00:00:00",
"2020-02-28T00:00:00",
"2020-02-29T00:00:00",
"2020-03-01T00:00:00",
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"2020-03-14T00:00:00",
"2020-03-15T00:00:00",
"2020-03-16T00:00:00",
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"2020-03-19T00:00:00",
"2020-03-20T00:00:00",
"2020-03-21T00:00:00",
"2020-03-22T00:00:00",
"2020-03-23T00:00:00",
"2020-03-24T00:00:00",
"2020-03-25T00:00:00",
"2020-03-26T00:00:00",
"2020-03-27T00:00:00",
"2020-03-28T00:00:00",
"2020-03-29T00:00:00"
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"timeZone": "NONE",
"interval": "DAY",
"start": "2020-01-01T00:00:00",
"end": "2020-03-30T00:00:00"
}
}
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["California_UnitedStates"],
"expressions":["JHU_ConfirmedDeaths"],
"interval":"DAY",
"start":"2020-01-01",
"end":"2020-03-30"
}
}
Response JSON:
{
"result": {
"California_UnitedStates": {
"JHU_ConfirmedDeaths": {
"type": "MaterializedTimeseriesDouble",
"count": 89,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
"2020-01-03T00:00:00",
"2020-01-04T00:00:00",
"2020-01-05T00:00:00",
"2020-01-06T00:00:00",
"2020-01-07T00:00:00",
"2020-01-08T00:00:00",
"2020-01-09T00:00:00",
"2020-01-10T00:00:00",
"2020-01-11T00:00:00",
"2020-01-12T00:00:00",
"2020-01-13T00:00:00",
"2020-01-14T00:00:00",
"2020-01-15T00:00:00",
"2020-01-16T00:00:00",
"2020-01-17T00:00:00",
"2020-01-18T00:00:00",
"2020-01-19T00:00:00",
"2020-01-20T00:00:00",
"2020-01-21T00:00:00",
"2020-01-22T00:00:00",
"2020-01-23T00:00:00",
"2020-01-24T00:00:00",
"2020-01-25T00:00:00",
"2020-01-26T00:00:00",
"2020-01-27T00:00:00",
"2020-01-28T00:00:00",
"2020-01-29T00:00:00",
"2020-01-30T00:00:00",
"2020-01-31T00:00:00",
"2020-02-01T00:00:00",
"2020-02-02T00:00:00",
"2020-02-03T00:00:00",
"2020-02-04T00:00:00",
"2020-02-05T00:00:00",
"2020-02-06T00:00:00",
"2020-02-07T00:00:00",
"2020-02-08T00:00:00",
"2020-02-09T00:00:00",
"2020-02-10T00:00:00",
"2020-02-11T00:00:00",
"2020-02-12T00:00:00",
"2020-02-13T00:00:00",
"2020-02-14T00:00:00",
"2020-02-15T00:00:00",
"2020-02-16T00:00:00",
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"2020-02-18T00:00:00",
"2020-02-19T00:00:00",
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"end": "2020-03-30T00:00:00"
}
}
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Hubei_China"],
"expressions":["JHU_ConfirmedRecoveries"],
"interval":"DAY",
"start":"2020-01-01",
"end":"2020-03-30"
}
}
Response JSON:
{
"result": {
"Hubei_China": {
"JHU_ConfirmedRecoveries": {
"type": "MaterializedTimeseriesDouble",
"count": 89,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
"2020-01-03T00:00:00",
"2020-01-04T00:00:00",
"2020-01-05T00:00:00",
"2020-01-06T00:00:00",
"2020-01-07T00:00:00",
"2020-01-08T00:00:00",
"2020-01-09T00:00:00",
"2020-01-10T00:00:00",
"2020-01-11T00:00:00",
"2020-01-12T00:00:00",
"2020-01-13T00:00:00",
"2020-01-14T00:00:00",
"2020-01-15T00:00:00",
"2020-01-16T00:00:00",
"2020-01-17T00:00:00",
"2020-01-18T00:00:00",
"2020-01-19T00:00:00",
"2020-01-20T00:00:00",
"2020-01-21T00:00:00",
"2020-01-22T00:00:00",
"2020-01-23T00:00:00",
"2020-01-24T00:00:00",
"2020-01-25T00:00:00",
"2020-01-26T00:00:00",
"2020-01-27T00:00:00",
"2020-01-28T00:00:00",
"2020-01-29T00:00:00",
"2020-01-30T00:00:00",
"2020-01-31T00:00:00",
"2020-02-01T00:00:00",
"2020-02-02T00:00:00",
"2020-02-03T00:00:00",
"2020-02-04T00:00:00",
"2020-02-05T00:00:00",
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HTTP URL:
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Daily case, death, hospitalization, and testing counts available at country and province level globally.
Metric | Description |
---|---|
CovidTrackingProject_ConfirmedCases | Cumulative total confirmed cases. |
CovidTrackingProject_ConfirmedDeaths | Cumulative total confirmed deaths. |
CovidTrackingProject_ConfirmedHospitalizations | Cumulative total confirmed hospitalizations. |
CovidTrackingProject_NegativeTests | Cumulative total negative COVID-19 tests. |
CovidTrackingProject_PendingTests | Non-cumulative daily pending COVID-19 tests. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
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"expressions":["CovidTrackingProject_ConfirmedDeaths"],
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
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HTTP URL:
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NOTE: ECDC cumulative counts are calculated relative to the "start" date entered. To retrieve the all-time cumulative total, use a "start" date of "2020-01-01".
Metric | Description |
---|---|
ECDC_ConfirmedCases | Cumulative total confirmed cases. |
ECDC_ConfirmedDeaths | Cumulative total confirmed deaths. |
ECDC_PerDay_Cumulative14DaysPer100000 | Cumulative 14-day case counts per 100,000 people. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
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Daily cumulative case and death counts available at:
Metric | Description |
---|---|
NYT_ConfirmedCases | Cumulative total confirmed cases. |
NYT_ConfirmedDeaths | Cumulative total confirmed deaths. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
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This dataset provides data on the number of deaths from all causes for a given location to present the full impact of the Covid-19 pandemic, since official Covid-19 death tolls often cannot account for people who have not been tested and those who died at home. All-cause mortality can supplement Covid-19 death counts and provide a better understanding of the true toll of the pandemic.
Metric | Description |
---|---|
NYT_AllCausesDeathsWeekly_Deaths_AllCauses | All-cause death case count, updated weekly. |
NYT_AllCausesDeathsWeekly_Excess_Deaths | Difference between all-cause deaths and expected deaths, updated weekly. |
NYT_AllCausesDeathsWeekly_Expected_Deaths_AllCauses | Expected all-cause deaths based on NYT linear model, updated weekly. |
NYT_AllCausesDeathsMonthly_Deaths_AllCauses | All-cause death case count, updated monthly. |
NYT_AllCausesDeathsMonthly_Excess_Deaths | Difference between all-cause deaths and expected deaths, updated monthly. |
NYT_AllCausesDeathsMonthly_Expected_Deaths_AllCauses | Expected all-cause deaths based on NYT linear model, updated monthly. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Austria", "Denmark"],
"expressions": ["NYT_AllCausesDeathsWeekly_Excess_Deaths"],
"start": "2020-04-01",
"end": "2020-05-01",
"interval":"DAY"
}
}
Response JSON:
{
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"count": 30,
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}
This dataset provides weekly national-level COVID-19 provisional death counts by age and sex for the United States, starting from Feb 1, 2020.
Weekly death counts are recorded as 0 if the value is less than 10.
The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document.
Metric | Description |
---|---|
AllSex_Under1_CovidDeaths | Number of COVID deaths under age 1. |
AllSex_Under1_TotalDeaths | Number of total deaths of select causes under age 1. |
Female_65_74_CovidDeaths | Number of COVID deaths from age 65 to 74, female. |
Female_65_74_TotalDeaths | Number of total deaths by COVID-19, pneumonia, and influenza from age 65 to 74, female. |
Male_85AndOver_CovidDeaths | Number of COVID deaths with age 85 and over, male. |
Male_85AndOver_TotalDeaths | Number of total deaths of select causes with age 85 and over, male. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["UnitedStates"],
"expressions": ["AllSex_85AndOver_CovidDeaths", "AllSex_85AndOver_TotalDeaths"],
"start": "2020-07-01",
"end": "2020-07-23",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
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"count": 22,
"dates": [
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"2020-07-12T00:00:00",
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"2020-07-17T00:00:00",
"2020-07-18T00:00:00",
"2020-07-19T00:00:00",
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"2020-07-22T00:00:00"
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This dataset provides daily state-level race-specific and ethnicity-specific COVID-19 case and death count data, available from April 2, 2020 and updated twice a week.
Metric | Description |
---|---|
CTP_CovidDeaths_AIAN | Number of COVID-19 deaths for race: American Indian or Alaska Native. |
CTP_CovidDeaths_Asian | Number of COVID-19 deaths for race: Asian. |
CTP_CovidDeaths_Black | Number of COVID-19 deaths for race: Black. |
CTP_CovidDeaths_EthnicityHispanic | Number of COVID-19 deaths for ethnicity: Hispanic. |
CTP_CovidDeaths_EthnicityNonHispanic | Number of COVID-19 deaths for ethnicity: Non-Hispanic. |
CTP_CovidDeaths_EthnicityUnknown | Number of COVID-19 deaths for ethnicity: Unknown. |
CTP_CovidDeaths_LatinX | Number of COVID-19 deaths for race: LatinX. |
CTP_CovidDeaths_Multiracial | Number of COVID-19 deaths for race: Multiracial. |
CTP_CovidDeaths_NHPI | Number of COVID-19 deaths for race: Native Hawaiian and Pacific Islander. |
CTP_CovidDeaths_Other | Number of COVID-19 deaths for race: Other. |
CTP_CovidDeaths_Unknown | Number of COVID-19 deaths for race: Unknown. |
CTP_CovidDeaths_White | Number of COVID-19 deaths for race: White. |
CTP_CovidCases_AIAN | Number of COVID-19 cases for race: American Indian or Alaska Native. |
CTP_CovidCases_Asian | Number of COVID-19 cases for race: Asian. |
CTP_CovidCases_Black | Number of COVID-19 cases for race: Black. |
CTP_CovidCases_EthnicityHispanic | Number of COVID-19 cases for ethnicity: Hispanic. |
CTP_CovidCases_EthnicityNonHispanic | Number of COVID-19 cases for ethnicity: Non-Hispanic. |
CTP_CovidCases_EthnicityUnknown | Number of COVID-19 cases for ethnicity: Unknown. |
CTP_CovidCases_LatinX | Number of COVID-19 cases for race: LatinX. |
CTP_CovidCases_Multiracial | Number of COVID-19 cases for race: Multiracial. |
CTP_CovidCases_NHPI | Number of COVID-19 cases for race: Native Hawaiian and Pacific Islander. |
CTP_CovidCases_Other | Number of COVID-19 cases for race: Other. |
CTP_CovidCases_Unknown | Number of COVID-19 cases for race: Unknown. |
CTP_CovidCases_White | Number of COVID-19 cases for race: White. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Texas_UnitedStates"],
"expressions": ["CTP_CovidDeaths_EthnicityHispanic", "CTP_CovidDeaths_EthnicityNonHispanic"],
"start": "2020-05-01",
"end": "2020-06-01",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
"Texas_UnitedStates": {
"CovidDeaths_EthnicityNonHispanic": {
"type": "MaterializedTimeseriesDouble",
"count": 31,
"dates": [
"2020-05-01T00:00:00",
"2020-05-02T00:00:00",
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"CovidDeaths_EthnicityHispanic": {
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Daily cumulative case and death counts available at:
Metric | Description |
---|---|
WHO_ConfirmedCases | Cumulative total confirmed cases. |
WHO_ConfirmedDeaths | Cumulative total confirmed deaths. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["KoreaSouth"],
"expressions":["WHO_ConfirmedCases"],
"interval":"DAY",
"start":"2020-01-01",
"end":"2020-04-04"
}
}
Response JSON:
{
"result": {
"KoreaSouth": {
"WHO_ConfirmedCases": {
"type": "MaterializedTimeseriesDouble",
"count": 94,
"dates": [
"2020-01-01T00:00:00",
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}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["France"],
"expressions":["WHO_ConfirmedDeaths"],
"interval":"DAY",
"start":"2020-01-01",
"end":"2020-04-04"
}
}
Response JSON:
{
"result": {
"France": {
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"type": "MaterializedTimeseriesDouble",
"count": 94,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
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}
}
Daily counts available for Italy at country, region, and province level.
Metric | Description |
---|---|
ITA_Active | Non-cumulative active cases. |
ITA_ActiveDelta | Change in active cases from previous day. |
ITA_ConfirmedCases | Cumulative total confirmed cases. |
ITA_ConfirmedDelta | Change in cumulative total confirmed cases from previous day. |
ITA_Deaths | Cumulative total deaths. |
ITA_HomeConfined | Non-cumulative count of individuals in home confinement. |
ITA_Hospitalized | Non-cumulative count of hospitalized patients. |
ITA_InIcuCurrently | Non-cumulative count of patients in intensive care unit (ICU). |
ITA_Recovered | Cumulative total recoveries. |
ITA_TotalPeopleTested | Cumulative total individuals tested. |
ITA_TotalTests | Cumulative total tests. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": [
"Tuscany_Italy"
],
"expressions": [
"ITA_Active",
"ITA_Hospitalized",
"ITA_Recovered",
"ITA_Deaths"
],
"start": "2020-01-01",
"end": "2020-05-12",
"interval": "DAY"
}
}
Response JSON:
{
"result": {
"Tuscany_Italy": {
"ITA_Active": {
"type": "MaterializedTimeseriesDouble",
"count": 132,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
"2020-01-03T00:00:00",
"2020-01-04T00:00:00",
"2020-01-05T00:00:00",
"2020-01-06T00:00:00",
"2020-01-07T00:00:00",
"2020-01-08T00:00:00",
"2020-01-09T00:00:00",
"2020-01-10T00:00:00",
"2020-01-11T00:00:00",
"2020-01-12T00:00:00",
"2020-01-13T00:00:00",
"2020-01-14T00:00:00",
"2020-01-15T00:00:00",
"2020-01-16T00:00:00",
"2020-01-17T00:00:00",
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"2020-03-01T00:00:00",
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"2020-04-17T00:00:00",
"2020-04-18T00:00:00",
"2020-04-19T00:00:00",
"2020-04-20T00:00:00",
"2020-04-21T00:00:00",
"2020-04-22T00:00:00",
"2020-04-23T00:00:00",
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"unit": {
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"interval": "DAY",
"start": "2020-01-01T00:00:00",
"end": "2020-05-12T00:00:00"
}
}
}
}
Daily cumulative case counts available for India at country and state or territory level.
NOTE: India cumulative counts are calculated relative to the "start" date entered. To retrieve the all-time cumulative total, use a "start" date of "2020-01-01".
Metric | Description |
---|---|
India_ConfirmedCases | Cumulative total cases. |
India_RecoveredCases | Cumulative total recoveries. |
India_DeceasedCases | Cumulative total deaths. |
India_TotalTested | Cumulative total individuals tested. |
India_TotalTestedNegative | Cumulative total individuals tested negative. |
Daily cumulative case counts available for South Korea at country and province level.
Metric | Description |
---|---|
KCDC_ConfirmedCases | Cumulative total confirmed cases. |
KCDC_ConfirmedDeaths | Cumulative total confirmed deaths. |
KCDC_ConfirmedRecoveries | Cumulative total confirmed recoveries. |
KCDC_ConfirmedNegativeTests | Cumulative total confirmed negative tests. |
KCDC_ConfirmedTested | Cumulative total individuals tested. |
KCDC_ConfirmedCases_0s | Cumulative total confirmed cases among individuals ages 0-9. |
KCDC_ConfirmedCases_10s | Cumulative total confirmed cases among individuals ages 10-19. |
KCDC_ConfirmedCases_20s | Cumulative total confirmed cases among individuals ages 20-29. |
KCDC_ConfirmedCases_30s | Cumulative total confirmed cases among individuals ages 30-39. |
KCDC_ConfirmedCases_40s | Cumulative total confirmed cases among individuals ages 40-49. |
KCDC_ConfirmedCases_50s | Cumulative total confirmed cases among individuals ages 50-59. |
KCDC_ConfirmedCases_60s | Cumulative total confirmed cases among individuals ages 60-69. |
KCDC_ConfirmedCases_70s | Cumulative total confirmed cases among individuals ages 70-79. |
KCDC_ConfirmedCases_80s | Cumulative total confirmed cases among individuals ages 80-89. |
KCDC_ConfirmedDeaths_0s | Cumulative total confirmed deaths among individuals ages 0-9. |
KCDC_ConfirmedDeaths_10s | Cumulative total confirmed deaths among individuals ages 10-19. |
KCDC_ConfirmedDeaths_20s | Cumulative total confirmed deaths among individuals ages 20-29. |
KCDC_ConfirmedDeaths_30s | Cumulative total confirmed deaths among individuals ages 30-39. |
KCDC_ConfirmedDeaths_40s | Cumulative total confirmed deaths among individuals ages 40-49. |
KCDC_ConfirmedDeaths_50s | Cumulative total confirmed deaths among individuals ages 50-59. |
KCDC_ConfirmedDeaths_60s | Cumulative total confirmed deaths among individuals ages 60-69. |
KCDC_ConfirmedDeaths_70s | Cumulative total confirmed deaths among individuals ages 70-79. |
KCDC_ConfirmedDeaths_80s | Cumulative total confirmed deaths among individuals ages 80-89. |
KCDC_ConfirmedCases_Male | Cumulative total confirmed cases among males. |
KCDC_ConfirmedCases_Female | Cumulative total confirmed cases among females. |
KCDC_ConfirmedDeaths_Male | Cumulative total confirmed deaths among males. |
KCDC_ConfirmedDeaths_Female | Cumulative total confirmed deaths among females. |
Daily counts available at a country, province, county, and city level globally.
Metric | Description |
---|---|
CDS_Active | Non-cumulative active cases. |
CDS_Cases | Cumulative total cases. |
CDS_Deaths | Cumulative total deaths. |
CDS_Discharged | Cumulative total individuals discharged from hospital care. |
CDS_GrowthFactor | Daily growth factor in cumulative cases, expressed as the ratio of the day's cumulative cases to the previous day's cumulative cases. |
CDS_Hospitalized | Cumulative count of hospitalizations. |
CDS_Hospitalized_Current | Non-cumulative active hospitalizations. |
CDS_ICU | Cumulative count of admissions to intensive care units (ICUs). |
CDS_ICU_Current | Non-cumulative active ICU patients. |
CDS_Recovered | Cumulative total recoveries. |
CDS_Tested | Cumulative total individuals tested. |
Projections of hospital resource use and COVID-19 deaths available daily at country and province level globally. Projections are available for future dates up to several months following the latest projection date.
Metric | Description |
---|---|
UniversityOfWashington_AdmisMean | Mean number of hospital admissions per day. |
UniversityOfWashington_AdmisLower | Lower uncertainy bound of number of hospital admissions per day. |
UniversityOfWashington_AdmisUpper | Upper uncertainy bound of number of hospital admissions per day. |
UniversityOfWashington_AllbedMean | Mean number of COVID-19 hospital beds needed per day. |
UniversityOfWashington_AllbedLower | Lower uncertainy bound of number of COVID-19 hospital beds needed per day. |
UniversityOfWashington_AllbedUpper | Upper uncertainy bound of number of COVID-19 hospital beds needed per day. |
UniversityOfWashington_BedoverMean | Mean BedOver, computed as (Number of COVID-19 hospital beds needed per day - Total hospital bed capacity - Average hospital bed use). |
UniversityOfWashington_BedoverLower | Lower uncertainty bound of BedOver. |
UniversityOfWashington_BedoverUpper | Upper uncertainty bound of BedOver. |
UniversityOfWashington_IcubedMean | Mean number of COVID-19 ICU beds needed per day. |
UniversityOfWashington_IcubedLower | Lower uncertainty bound of number of COVID-19 ICU beds needed per day. |
UniversityOfWashington_IcubedUpper | Upper uncertainty bound of number of COVID-19 ICU beds needed per day. |
UniversityOfWashington_IcuoverMean | Mean ICUOver, computed as (Number of COVID-19 ICU beds needed per day - Total ICU bed capacity - Average ICU bed use). |
UniversityOfWashington_IcuoverLower | Lower uncertainy bound of ICUOver. |
UniversityOfWashington_IcuoverUpper | Upper uncertainy bound of ICUOver. |
UniversityOfWashington_InvvenMean | Mean number of invasive ventilation procedures needed per day. |
UniversityOfWashington_InvvenLower | Lower uncertainty bound of number of invasive ventilation procedures needed per day. |
UniversityOfWashington_InvvenUpper | Upper uncertainty bound of number of invasive ventilation procedures needed per day. |
UniversityOfWashington_NewicuMean | Mean number of new ICU admissions per day . |
UniversityOfWashington_NewicuLower | Lower uncertainty bound of new ICU admissions per day . |
UniversityOfWashington_NewicuUpper | Upper uncertainty bound of new ICU admissions per day . |
UniversityOfWashington_DeathsMean | Mean number of COVID-19 deaths per day. |
UniversityOfWashington_DeathsLower | Lower uncertainy bound of number of COVID-19 deaths per day. |
UniversityOfWashington_DeathsUpper | Upper uncertainy bound of number of COVID-19 deaths per day. |
UniversityOfWashington_TotdeaMean | Mean number of cumulative COVID-19 deaths . |
UniversityOfWashington_TotdeaLower | Lower uncertainty bound of number of cumulative COVID-19 deaths . |
UniversityOfWashington_TotdeaUpper | Upper uncertainty bound of number of cumulative COVID-19 deaths |
Demographic data available annually for the United States at a country, state, and county level. The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document.
NOTE: Please set the
interval
field toYEAR
andstart
field to a date no earlier than2011-01-01
in the API request to ensure performance.
Metric | Description |
---|---|
TotalPopulation | Total populaton. |
Male_Total_Population | Total male population. |
Female_Total_Population | Total female population. |
MaleAndFemale_Under18_Population | Total population, under age 18 (both sexes). |
MaleAndFemale_AtLeast65_Population | Total population, at least age 65 (both sexes). |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["SouthCarolina_UnitedStates", "Georgia_UnitedStates"],
"expressions": ["TotalPopulation"],
"start": "2011-01-01",
"end": "2020-01-01",
"interval": "YEAR"
}
}
Response JSON:
{
"result": {
"SouthCarolina_UnitedStates": {
"TotalPopulation": {
"type": "MaterializedTimeseriesDouble",
"count": 9,
"dates": [
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
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],
"missing": [
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],
"timeZone": "NONE",
"interval": "YEAR",
"start": "2011-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
},
"Georgia_UnitedStates": {
"TotalPopulation": {
"type": "MaterializedTimeseriesDouble",
"count": 9,
"dates": [
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
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],
"missing": [
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],
"timeZone": "NONE",
"interval": "YEAR",
"start": "2011-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
}
}
}
Global demographic data and population projections available annually at country level. The full list of metrics is available for download in this Microsoft Excel document.
Metric | Description |
---|---|
Female0to4_InternationalCensus | Total female population, with age from 0 to 4. |
Male25to29_InternationalCensus | Total male population, with age from 25 to 29. |
Female33_InternationalCensus | Total female population, with age 33. |
FemaleAtLeast100_InternationalCensus | Total female population, with age at least 100. |
Malefemale60_InternationalCensus | Total population of both sexes, with age 60. |
Fertility15To19International | Age specific fertility rate for age 15-19 (births per 1,000 population). |
CrudeBirthRateInternational | Live births during a given year, per 1,000 mid-year total population. |
CrudeDeathRateInternational | Deaths during a given year, per 1,000 mid-year total population. |
GrossReproductionInternational | Gross reproduction rate (lifetime female births per woman). |
GrowthRateInternational | Average annual percent change in the population. |
InfantMortalityInternational | Both sexes infant mortality rate (infant deaths per 1,000 population). |
InfantMortalityFemaleInternational | Female infant mortality rate (infant deaths per 1,000 population). |
InfantMortalityMaleInternational | Male infant mortality rate (infant deaths per 1,000 population). |
LifeExpectancyInternational | Both sexes life expectancy at birth (years). |
LifeExpectancyFemaleInternational | Female life expectancy at birth (years). |
LifeExpectancyMaleInternational | Male life expectancy at birth (years). |
MortalityRateUnder5International | Both sexes under-5 mortality rate (probability of dying between ages 0 and 5) per year. |
MortalityRateUnder5InternationalFemale | Female sexes under-5 mortality rate (probability of dying between ages 0 and 5) per year. |
MortalityRateUnder5InternationalMale | Male sexes under-5 mortality rate (probability of dying between ages 0 and 5) per year. |
NaturalIncreaseRateInternational | Natural increase (births - deaths) per 1,000 population per year. |
NetMigrationInternational | Difference between the number of migrants entering and those leaving a country in a year, per 1,000 mid-year population. |
SexRatioInternational | Sex ratio at birth (male births per female birth). |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Mexico", "UnitedStates"],
"expressions": ["NetMigrationInternational"],
"start": "2011-01-01",
"end": "2020-01-01",
"interval": "YEAR"
}
}
Response JSON:
{
"result": {
"Mexico": {
"NetMigrationInternational": {
"type": "MaterializedTimeseriesDouble",
"count": 9,
"dates": [
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
-0.31,
-0.96,
-1.6,
-1.64,
-1.68,
-1.73,
-1.77,
-1.81,
-1.85
],
"missing": [
0,
0,
0,
0,
0,
0,
0,
0,
0
],
"unit": {
"id": "migrationRate"
},
"timeZone": "NONE",
"interval": "YEAR",
"start": "2011-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
},
"UnitedStates": {
"NetMigrationInternational": {
"type": "MaterializedTimeseriesDouble",
"count": 9,
"dates": [
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
2.8,
2.9,
3.0,
3.4,
3.4,
3.5,
3.4,
3.83,
3.82
],
"missing": [
0,
0,
0,
0,
0,
0,
0,
0,
0
],
"unit": {
"id": "migrationRate"
},
"timeZone": "NONE",
"interval": "YEAR",
"start": "2011-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
}
}
}
Population estimates of gender-specific, race-specific, and ethnicity-specific groups available for counties and states in the United States from 2010 to 2019.
To see the methodology adopted by the US Census Bureau to produce these estimates, please see their documentation here.
NOTE: Please set the
interval
field toYEAR
andstart
field to a date no earlier than2011-01-01
in the API request to ensure performance.
The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document.
Metric | Description |
---|---|
MaleTotal_AnyEthnicity_WA_USCensus | Estimate of Male Hispanic/Not Hispanic population with any age and race: White alone. |
FemaleTotal_AnyEthnicity_BA_USCensus | Estimate of Female Hispanic/Not Hispanic population with any age and race: Black or African American alone. |
MaleTotal_AnyEthnicity_IA_USCensus | Estimate of Male Hispanic/Not Hispanic population with any age and race: American Indian and Alaska Native alone. |
FemaleTotal_AnyEthnicity_AA_USCensus | Estimate of Female Hispanic/Not Hispanic population with any age and race: Asian alone. |
MaleTotal_AnyEthnicity_NA_USCensus | Estimate of Male Hispanic/Not Hispanic population with any age and race: Native Hawaiian and Other Pacific Islander alone. |
FemaleTotal_AnyEthnicity_TOM_USCensus | Estimate of Female Hispanic/Not Hispanic population with any age and race: Two or More Races. |
MaleTotal_NotHispanic_AnyRace_USCensus | Estimate of Male Not Hispanic population with any age and race: Any race. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Albany_NewYork_UnitedStates"],
"expressions": ["FemaleTotal_NotHispanic_BA_USCensus"],
"start": "2011-01-01",
"end": "2020-01-01",
"interval": "YEAR"
}
}
Response JSON:
{
"result": {
"Albany_NewYork_UnitedStates": {
"FemaleTotal_NotHispanic_BA_USCensus": {
"type": "MaterializedTimeseriesDouble",
"count": 9,
"dates": [
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
19282.0,
19564.0,
19718.0,
19796.0,
19877.0,
20173.0,
20369.0,
20498.0,
20503.0
],
"missing": [
0,
0,
0,
0,
0,
0,
0,
0,
0
],
"timeZone": "NONE",
"interval": "YEAR",
"start": "2011-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
}
}
}
Demographic and economic data available annually at a country level. The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document.
Metric | Description |
---|---|
PopulationGrowth | Population growth (annual %). |
SurvivalRateto65_Male | Survival to age 65, male (% of cohort). |
TotalFertilityRate | Fertility rate, total (births per woman). |
HandwashingFacilities_PercentPopulation | People with basic handwashing facilities including soap and water (% of population). |
Physicians | Physicians (per 1,000 people). |
HospitalBeds | Hospital beds (per 1,000 people). |
OfficialExchangeRate | Official exchange rate (LCU per US$, period average). |
ConsumerPriceIndex | Consumer price index (2010 = 100). |
Annual or quarterly economic data at county- and state-level for United States, including compensation, GDP, and job data by industry. When a metric is called on a state-level location and at a monthly interval, if quarterly data is available, the metric will be evaluated based on quarterly data.
The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document.
See more detail about the definitions and methods used by the BEA to produce this data in the Description column of the document.
Metric | Description |
---|---|
BEA_AverageEarningsPerJob_Dollars | Average earnings per job in dollars, calculated by dividing total earnings by total full-time and part-time employment. |
BEA_AverageWagesAndSalaries_Dollars | Average wages and salaries in dollars, calculated by dividing wages and salaries by total wage and salary employment. |
BEA_CompensationOfEmployees_ApparelManufacturing_Dollars | Employee compensation in dollars for the Apparel Manufacturing industry. |
BEA_Employment_AirTransportation_Jobs | Number of jobs in the Air Transportation industry. |
BEA_NominalGDP_Construction_Dollars | Nominal GDP of the Construction industry, in dollars. |
BEA_PersonalCurrentTransferReceipts_MedicalBenefits_Dollars | Personal current transfer receipts for medical benefits, in dollars. This value consists of income payments to persons for which no current services are performed and net insurance settlements. |
BEA_PersonalIncome_Dollars | Personal income in dollars. |
BEA_RealGDP_EducationalServices_2012Dollars | Real GDP of the Education Services industry, measured in 2012 dollars. |
BEA_TotalEmployment_Jobs | Total number of employment. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Alameda_California_UnitedStates"],
"expressions": [
"BEA_RealGDP_AccommodationAndFoodServices_2012Dollars",
"BEA_RealGDP_FinanceAndInsurance_2012Dollars"
],
"start": "2000-01-01",
"end": "2020-01-01",
"interval":"YEAR"
}
}
Response JSON:
{
"result": {
"Alameda_California_UnitedStates": {
"BEA_RealGDP_AccommodationAndFoodServices_2012Dollars": {
"type": "MaterializedTimeseriesDouble",
"count": 20,
"dates": [
"2000-01-01T00:00:00",
"2001-01-01T00:00:00",
"2002-01-01T00:00:00",
"2003-01-01T00:00:00",
"2004-01-01T00:00:00",
"2005-01-01T00:00:00",
"2006-01-01T00:00:00",
"2007-01-01T00:00:00",
"2008-01-01T00:00:00",
"2009-01-01T00:00:00",
"2010-01-01T00:00:00",
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
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2.073027E9,
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2.195249E9,
2.464973E9,
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0.0
],
"missing": [
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],
"timeZone": "NONE",
"interval": "YEAR",
"start": "2000-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
},
"BEA_RealGDP_FinanceAndInsurance_2012Dollars": {
"type": "MaterializedTimeseriesDouble",
"count": 20,
"dates": [
"2000-01-01T00:00:00",
"2001-01-01T00:00:00",
"2002-01-01T00:00:00",
"2003-01-01T00:00:00",
"2004-01-01T00:00:00",
"2005-01-01T00:00:00",
"2006-01-01T00:00:00",
"2007-01-01T00:00:00",
"2008-01-01T00:00:00",
"2009-01-01T00:00:00",
"2010-01-01T00:00:00",
"2011-01-01T00:00:00",
"2012-01-01T00:00:00",
"2013-01-01T00:00:00",
"2014-01-01T00:00:00",
"2015-01-01T00:00:00",
"2016-01-01T00:00:00",
"2017-01-01T00:00:00",
"2018-01-01T00:00:00",
"2019-01-01T00:00:00"
],
"data": [
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"missing": [
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"timeZone": "NONE",
"interval": "YEAR",
"start": "2000-01-01T00:00:00",
"end": "2020-01-01T00:00:00"
}
}
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Illinois_UnitedStates"],
"expressions": [
"BEA_WagesAndSalaries_Dollars",
"BEA_PersonalCurrentTransferReceipts_SocialSecurityBenefits_Dollars"
],
"start": "2010-01-01",
"end": "2020-01-01",
"interval":"MONTH"
}
}
Response JSON:
{
"result": {
"Illinois_UnitedStates": {
"BEA_WagesAndSalaries_Dollars": {
"type": "MaterializedTimeseriesDouble",
"count": 120,
"dates": [
"2010-01-01T00:00:00",
"2010-02-01T00:00:00",
"2010-03-01T00:00:00",
"2010-04-01T00:00:00",
"2010-05-01T00:00:00",
"2010-06-01T00:00:00",
"2010-07-01T00:00:00",
"2010-08-01T00:00:00",
"2010-09-01T00:00:00",
"2010-10-01T00:00:00",
"2010-11-01T00:00:00",
"2010-12-01T00:00:00",
"2011-01-01T00:00:00",
"2011-02-01T00:00:00",
"2011-03-01T00:00:00",
"2011-04-01T00:00:00",
"2011-05-01T00:00:00",
"2011-06-01T00:00:00",
"2011-07-01T00:00:00",
"2011-08-01T00:00:00",
"2011-09-01T00:00:00",
"2011-10-01T00:00:00",
"2011-11-01T00:00:00",
"2011-12-01T00:00:00",
"2012-01-01T00:00:00",
"2012-02-01T00:00:00",
"2012-03-01T00:00:00",
"2012-04-01T00:00:00",
"2012-05-01T00:00:00",
"2012-06-01T00:00:00",
"2012-07-01T00:00:00",
"2012-08-01T00:00:00",
"2012-09-01T00:00:00",
"2012-10-01T00:00:00",
"2012-11-01T00:00:00",
"2012-12-01T00:00:00",
"2013-01-01T00:00:00",
"2013-02-01T00:00:00",
"2013-03-01T00:00:00",
"2013-04-01T00:00:00",
"2013-05-01T00:00:00",
"2013-06-01T00:00:00",
"2013-07-01T00:00:00",
"2013-08-01T00:00:00",
"2013-09-01T00:00:00",
"2013-10-01T00:00:00",
"2013-11-01T00:00:00",
"2013-12-01T00:00:00",
"2014-01-01T00:00:00",
"2014-02-01T00:00:00",
"2014-03-01T00:00:00",
"2014-04-01T00:00:00",
"2014-05-01T00:00:00",
"2014-06-01T00:00:00",
"2014-07-01T00:00:00",
"2014-08-01T00:00:00",
"2014-09-01T00:00:00",
"2014-10-01T00:00:00",
"2014-11-01T00:00:00",
"2014-12-01T00:00:00",
"2015-01-01T00:00:00",
"2015-02-01T00:00:00",
"2015-03-01T00:00:00",
"2015-04-01T00:00:00",
"2015-05-01T00:00:00",
"2015-06-01T00:00:00",
"2015-07-01T00:00:00",
"2015-08-01T00:00:00",
"2015-09-01T00:00:00",
"2015-10-01T00:00:00",
"2015-11-01T00:00:00",
"2015-12-01T00:00:00",
"2016-01-01T00:00:00",
"2016-02-01T00:00:00",
"2016-03-01T00:00:00",
"2016-04-01T00:00:00",
"2016-05-01T00:00:00",
"2016-06-01T00:00:00",
"2016-07-01T00:00:00",
"2016-08-01T00:00:00",
"2016-09-01T00:00:00",
"2016-10-01T00:00:00",
"2016-11-01T00:00:00",
"2016-12-01T00:00:00",
"2017-01-01T00:00:00",
"2017-02-01T00:00:00",
"2017-03-01T00:00:00",
"2017-04-01T00:00:00",
"2017-05-01T00:00:00",
"2017-06-01T00:00:00",
"2017-07-01T00:00:00",
"2017-08-01T00:00:00",
"2017-09-01T00:00:00",
"2017-10-01T00:00:00",
"2017-11-01T00:00:00",
"2017-12-01T00:00:00",
"2018-01-01T00:00:00",
"2018-02-01T00:00:00",
"2018-03-01T00:00:00",
"2018-04-01T00:00:00",
"2018-05-01T00:00:00",
"2018-06-01T00:00:00",
"2018-07-01T00:00:00",
"2018-08-01T00:00:00",
"2018-09-01T00:00:00",
"2018-10-01T00:00:00",
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"2018-12-01T00:00:00",
"2019-01-01T00:00:00",
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"2019-03-01T00:00:00",
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"2019-05-01T00:00:00",
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"2019-08-01T00:00:00",
"2019-09-01T00:00:00",
"2019-10-01T00:00:00",
"2019-11-01T00:00:00",
"2019-12-01T00:00:00"
],
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}
Metric | Description |
---|---|
BLS_LaborForcePopulation | Population of the labor force. |
BLS_EmployedPopulation | Civilian noninstitutional population aged 16 years and over that is employed. |
BLS_UnemployedPopulation | Number of civilians aged 16 years or older who: had no employment during the reference week, were available for work, except for temporary illness, and had made specific efforts to find employment sometime during the 4-week period ending with the reference week. |
BLS_UnemploymentRate | Unemployed population divided by labor force population, in percent. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Austin_Texas_UnitedStates"],
"expressions": [
"BLS_UnemploymentRate"
],
"start": "2019-01-01",
"end": "2020-06-01",
"interval":"MONTH"
}
}
Response JSON:
{
"result": {
"Austin_Texas_UnitedStates": {
"BLS_UnemploymentRate": {
"type": "MaterializedTimeseriesDouble",
"count": 17,
"dates": [
"2019-01-01T00:00:00",
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"2019-09-01T00:00:00",
"2019-10-01T00:00:00",
"2019-11-01T00:00:00",
"2019-12-01T00:00:00",
"2020-01-01T00:00:00",
"2020-02-01T00:00:00",
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HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["California_UnitedStates"],
"expressions": [
"BLS_UnemployedPopulation",
"BLS_LaborForcePopulation"
],
"start": "2019-01-01",
"end": "2020-06-01",
"interval":"MONTH"
}
}
Response JSON:
{
"result": {
"California_UnitedStates": {
"BLS_UnemployedPopulation": {
"type": "MaterializedTimeseriesDouble",
"count": 17,
"dates": [
"2019-01-01T00:00:00",
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}
This dataset provides the following high-frequency economic data for United States locations:
The table below contains example metrics. Note that some metrics are only available up to several weeks or months before the current date, depending on availability in the source dataset. The full list of metrics, their descriptions, and their availability at different location levels is available for download in this Microsoft Excel document.
See more detail about the source and definition of these economic indicators here.
Metric | Description |
---|---|
OIET_Affinity_SpendAcf | Seasonally adjusted credit/debit card spending relative to January 4-31, 2020 in accomodation and food service (ACF) MCCs, 7 day moving average, 7 day moving average. |
OIET_BurningGlass_BgPosts | Average level of job postings relative to January 4-31, 2020. |
OIET_BurningGlass_BgPostsSs30 | Average level of job postings relative to January 4-31, 2020 in manufacturing (NAICS supersector 30). |
OIET_UIClaims_InitialClaims | Count of newly requested claims to begin a period of unemployment insurance eligibility. |
OIET_UIClaims_InitialClaimsRate | Initial claims per 100 people in the 2019 labor force. |
OIET_Employment_All | Employment level relative to Jan 4-31, 2020 for all workers. |
OIET_Employment_IncLow | Employment level relative to Jan 4-31, 2020 for workers in the bottom quartile of the income distribution (incomes approximately under $27,000). |
OIET_Employment_ss60 | Employment level relative to Jan 4-31, 2020 for workers in professional and business services (NAICS supersector 60). |
OIET_Employment_ss70 | Employment level relative to Jan 4-31, 2020 for workers in leisure and hospitality (NAICS supersector 70). |
OIET_WomplyRevenue_RevenueAll | Percent change in net revenue for small businesses, calculated as a seven-day moving average, seasonally adjusted, and indexed to January 4-31 2020. |
OIET_WomplyMerchants_MerchantsAll | Percent change in number of small businesses open calculated as a seven-day moving average seasonally adjusted and indexed to January 4-31 2020. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["California_UnitedStates"],
"expressions": [
"OIET_Affinity_SpendHcs",
"OIET_LowIncEmpAllBusinesses_Emp62"
],
"start": "2020-01-01",
"end": "2020-06-01",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
"California_UnitedStates": {
"OIET_Affinity_SpendHcs": {
"type": "MaterializedTimeseriesDouble",
"count": 152,
"dates": [
"2020-01-01T00:00:00",
"2020-01-02T00:00:00",
"2020-01-03T00:00:00",
"2020-01-04T00:00:00",
"2020-01-05T00:00:00",
"2020-01-06T00:00:00",
"2020-01-07T00:00:00",
"2020-01-08T00:00:00",
"2020-01-09T00:00:00",
"2020-01-10T00:00:00",
"2020-01-11T00:00:00",
"2020-01-12T00:00:00",
"2020-01-13T00:00:00",
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}
Monthly residential housing inventory and listing statistics for US counties and states. The table below contains example metrics. The full list of metrics is available for download in this Microsoft Excel document. See more detail about the definition of inventory indicators here.
Metric | Description |
---|---|
Realtor_AvgMedianListingPrice | Average of the monthly median listing price within the specified geography. |
Realtor_AvgMedianListingPricePerSquareFeet | Average of the monthly median listing price per square foot within the specified geography. |
Realtor_ActiveListingCount | Number of active listings within the specified geography. |
Realtor_NewListingCount | Number of new listings added to the market within the specified geography. |
Realtor_PriceIncreasedCount | Number of listings which have had their price increased within the specified geography. |
Realtor_PriceReducedCount | Number of listings which have had their price reduced within the specified geography. |
Realtor_PendingListingCount | Number of pending listings within the specified geography during the specified month, if a pending definition is available for that geography. |
Realtor_TotalListingCount | Total number of both active listings and pending listings within the specified geography. Only available at county level. |
Realtor_AvgMedianDaysOnMarket | Average of the monthly median number of days property listings spend on the market within the specified geography. |
Realtor_AvgMedianSquareFeet | Average of the monthly median listing square feet within the specified geography. |
Realtor_AvgPendingRatio | Average of the monthly ratio of the pending listing count to the active listing count within the specified geography. Only available at county level. |
Realtor_AverageListingPrice | Average listing price within the specified geography. |
Realtor_AvgPercentChangeMedianListingPriceMm | Average percentage change in the median listing price from the previous month. |
Realtor_AvgPercentChangeMedianListingPriceYy | Average percentage change in the median listing price from the same month in the previous year. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["Arizona_UnitedStates"],
"expressions": [
"Realtor_PriceIncreasedCount",
"Realtor_PriceReducedCount"
],
"start": "2019-01-01",
"end": "2020-06-01",
"interval":"MONTH"
}
}
Response JSON:
{
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"Arizona_UnitedStates": {
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"count": 17,
"dates": [
"2019-01-01T00:00:00",
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],
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"data": [
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"unit": {
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"interval": "MONTH",
"start": "2019-01-01T00:00:00",
"end": "2020-06-01T00:00:00"
}
}
}
}
Mobility data available daily at a country, province, and city level globally. See more detail about the collection of mobility data and definition of mobility index here.
Metric | Description |
---|---|
Apple_DrivingMobility | Normalized driving routing requests, where 100 indicates number of requests on January 13, 2020. |
Apple_WalkingMobility | Normalized walking routing requests, where 100 indicates number of requests on January 13, 2020. |
Apple_TransitMobility | Normalized transit routing requests, where 100 indicates number of requests on January 13, 2020. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["DistrictofColumbia_UnitedStates"],
"expressions": [
"Apple_WalkingMobility",
"Apple_DrivingMobility",
"Google_ParksMobility",
"Google_ResidentialMobility"
],
"start": "2020-03-01",
"end": "2020-04-01",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
"DistrictofColumbia_UnitedStates": {
"Apple_WalkingMobility": {
"type": "MaterializedTimeseriesDouble",
"count": 31,
"dates": [
"2020-03-01T00:00:00",
"2020-03-02T00:00:00",
"2020-03-03T00:00:00",
"2020-03-04T00:00:00",
"2020-03-05T00:00:00",
"2020-03-06T00:00:00",
"2020-03-07T00:00:00",
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"2020-03-10T00:00:00",
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"2020-03-14T00:00:00",
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"2020-03-16T00:00:00",
"2020-03-17T00:00:00",
"2020-03-18T00:00:00",
"2020-03-19T00:00:00",
"2020-03-20T00:00:00",
"2020-03-21T00:00:00",
"2020-03-22T00:00:00",
"2020-03-23T00:00:00",
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"2020-03-27T00:00:00",
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"data": [
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93.05,
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58.62,
53.16,
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"Apple_DrivingMobility": {
"type": "MaterializedTimeseriesDouble",
"count": 31,
"dates": [
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},
"Google_ResidentialMobility": {
"type": "MaterializedTimeseriesDouble",
"count": 31,
"dates": [
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"Google_ParksMobility": {
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"count": 31,
"dates": [
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}
Mobility data available daily at a country, province, and city level globally. The value for each day is normalized by day of the week, where 100 indicates the median value for that day of the week from January 3, 2020 through February 6, 2020.
See more detail about the collection of mobility data and definition of mobility index here.
Metric | Description |
---|---|
Google_GroceryMobility | Normalized mobility trends for places including grocery markets, food warehouses, farmers markets, specialty food shops, drug stores, and pharmacies. |
Google_ParksMobility | Normalized mobility trends for places including local parks, national parks, public beaches, marinas, dog parks, plazas, and public gardens. |
Google_TransitStationsMobility | Normalized mobility trends for places including public transit hubs, subway stations, bus stations, and train stations. |
Google_RetailMobility | Normalized mobility trends for places including restaurants, cafes, shopping centers, theme parks, museums, libraries, and movie theaters. |
Google_ResidentialMobility | Normalized mobility trends for residences. |
Google_WorkplacesMobility | Normalized mobility trends for workplaces. |
Device count and device exposure index (DEX) data available daily at the county and state level in the United States.
The device exposure index (DEX) of a state or county location refers to the average number of distinct devices that visited any of the commercial venues that a particular smartphone at this location visited on a given day.
Device counts and DEX of a particular demographic group (based on education, income, or ethnicity) is computed by inferring the user’s permanent block of residence and using 2014-2018 ACS statistics of the neighborhood. Education level (1-4) is classified based on which quartile the neighborhood’s college share resides. Income level (1-4) is classified based on which quartile the neighborhood’s income resides.
See more detailed description of the methodology and index definition here.
The full list of metrics is available for download in this Microsoft Excel document.
Metric | Description |
---|---|
PlaceIQ_DeviceCount | Number of devices residing in a location. |
PlaceIQ_DeviceExposure | Device exposure index (DEX): average number of distinct devices that also visited any of the commercial venues that a particular device visited. |
PlaceIQ_DeviceCount_Adjusted | Number of devices at this location, adjusted to counteract sample bias caused by shelter-in-place. |
PlaceIQ_DeviceExposure_Adjusted | Device exposure index (DEX), adjusted to counteract sample bias caused by shelter-in-place. |
PlaceIQ_DeviceCount_Education1 | Device count for lowest education group, of four (4). |
PlaceIQ_DeviceExposure_Education1 | DEX for lowest education group, of four (4). |
PlaceIQ_DeviceCount_Education1_Adjusted | Adjusted device count for lowest education group, of four (4). |
PlaceIQ_DeviceExposure_Education1_Adjusted | Adjusted DEX for lowest education group, of four (4). |
PlaceIQ_DeviceCount_Income2 | Device count for second-lowest income group, of four (4). |
PlaceIQ_DeviceExposure_RaceAsian | DEX for Asian ethnic group. |
PlaceIQ_DeviceCount_RaceBlack_Adjusted | Adjusted device count for Black ethnic group. |
PlaceIQ_DeviceExposure_RaceWhite_Adjusted | Adjusted DEX for White ethnic group. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec":{
"ids":["SantaClara_California_UnitedStates"],
"expressions":[ "PlaceIQ_DeviceExposure", "PlaceIQ_DeviceExposure_Adjusted"],
"start": "2020-05-01",
"end": "2020-05-15",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
"SantaClara_California_UnitedStates": {
"PlaceIQ_DeviceExposure": {
"type": "MaterializedTimeseriesDouble",
"count": 14,
"dates": [
"2020-05-01T00:00:00",
"2020-05-02T00:00:00",
"2020-05-03T00:00:00",
"2020-05-04T00:00:00",
"2020-05-05T00:00:00",
"2020-05-06T00:00:00",
"2020-05-07T00:00:00",
"2020-05-08T00:00:00",
"2020-05-09T00:00:00",
"2020-05-10T00:00:00",
"2020-05-11T00:00:00",
"2020-05-12T00:00:00",
"2020-05-13T00:00:00",
"2020-05-14T00:00:00"
],
"data": [
26.0217,
43.9594,
32.8597,
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21.8725,
21.6751,
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56.5068,
40.1078,
19.8933,
20.2918,
20.6562,
21.388
],
"missing": [
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"unit": {
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},
"timeZone": "NONE",
"interval": "DAY",
"start": "2020-05-01T00:00:00",
"end": "2020-05-15T00:00:00"
},
"PlaceIQ_DeviceExposure_Adjusted": {
"type": "MaterializedTimeseriesDouble",
"count": 14,
"dates": [
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"2020-05-02T00:00:00",
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],
"data": [
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"unit": {
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"timeZone": "NONE",
"interval": "DAY",
"start": "2020-05-01T00:00:00",
"end": "2020-05-15T00:00:00"
}
}
}
}
Policy indices are aggregates of individual policy indicators (see more detail in PolicyDetail) and show the level of government response along a certain policy dimension.
For example, the Containment and Health index is an average of all policy values of C- and H-type policies for a location on a given day.
The full list of metrics is available for download in this Microsoft Excel document.
See more detailed description of policy types and indices here.
Metric | Description |
---|---|
OxCGRT_Policy_C1_Flag | Flag value (whether the policy is targets at a specific region or applies to the whole country) of C1 policy. |
OxCGRT_Policy_C1_SchoolClosing | C1 policy index: level of the governments response along C1 policy dimension. |
OxCGRT_Policy_C8_InternationalTravelControls | C8 policy index: level of the governments response along C8 policy dimension. |
OxCGRT_Policy_E1_IncomeSupport | E1 policy index: level of the governments response along E1 policy dimension. |
OxCGRT_Policy_ConfirmedCases | Confirmed case count. |
OxCGRT_Policy_ConfirmedDeaths | Confirmed death count. |
OxCGRT_Policy_StringencyIndex | Level of the governments response along stringency dimension (all C indicators and H1). |
OxCGRT_Policy_StringencyIndexForDisplay | Stringency index with extrapolation and smoothing. |
OxCGRT_Policy_StringencyLegacyIndex | Legacy index value of governmennt response stringency. |
OxCGRT_Policy_StringencyLegacyIndexForDisplay | Legacy stringency index with extrapolation and smoothing. |
OxCGRT_Policy_GovernmentResponseIndex | Level of overall governments response, taking account of all indicators. |
OxCGRT_Policy_GovernmentResponseIndexForDisplay | Government response index with extrapolation and smoothing. |
OxCGRT_Policy_ContainmentHealthIndex | Level of the governments response along containment and health dimension (all C and H indicators). |
OxCGRT_Policy_ContainmentHealthIndexForDisplay | Containment and health index with extrapolation and smoothing. |
OxCGRT_Policy_EconomicSupportIndex | Level of the governments response along economic support dimension (all E indicators). |
OxCGRT_Policy_EconomicSupportIndexForDisplay | Economic support index with extrapolation and smoothing. |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["UnitedStates", "Canada"],
"expressions": ["OxCGRT_Policy_ContainmentHealthIndex"],
"start": "2020-02-01",
"end": "2020-05-01",
"interval":"DAY"
}
}
Response JSON:
{
"result": {
"Canada": {
"OxCGRT_Policy_ContainmentHealthIndex": {
"type": "MaterializedTimeseriesDouble",
"count": 90,
"dates": [
"2020-02-01T00:00:00",
"2020-02-02T00:00:00",
"2020-02-03T00:00:00",
"2020-02-04T00:00:00",
"2020-02-05T00:00:00",
"2020-02-06T00:00:00",
"2020-02-07T00:00:00",
"2020-02-08T00:00:00",
"2020-02-09T00:00:00",
"2020-02-10T00:00:00",
"2020-02-11T00:00:00",
"2020-02-12T00:00:00",
"2020-02-13T00:00:00",
"2020-02-14T00:00:00",
"2020-02-15T00:00:00",
"2020-02-16T00:00:00",
"2020-02-17T00:00:00",
"2020-02-18T00:00:00",
"2020-02-19T00:00:00",
"2020-02-20T00:00:00",
"2020-02-21T00:00:00",
"2020-02-22T00:00:00",
"2020-02-23T00:00:00",
"2020-02-24T00:00:00",
"2020-02-25T00:00:00",
"2020-02-26T00:00:00",
"2020-02-27T00:00:00",
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"interval": "DAY",
"start": "2020-02-01T00:00:00",
"end": "2020-05-01T00:00:00"
}
},
"UnitedStates": {
"OxCGRT_Policy_ContainmentHealthIndex": {
"type": "MaterializedTimeseriesDouble",
"count": 90,
"dates": [
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"interval": "DAY",
"start": "2020-02-01T00:00:00",
"end": "2020-05-01T00:00:00"
}
}
}
}
Historical weather data are available at a country, province, and county level globally beginning in mid-2018 up to the most recent available date. Predicted AverageDailyTemperature is additionally available for two weeks from the current date.
Metric | Description |
---|---|
AverageDailyTemperature | Average daily temperature in Fahrenheit. |
AverageDewPoint | Average dew point temperature in Fahrenheit. |
AverageRelativeHumidity | Average relative humidity in percentage. |
AverageSurfaceAirPressure | Surface air pressure in inches of mercury. |
AveragePrecipitation | Average hourly precipitation in inches. |
AverageWindSpeed | Average wind speed in miles per hour. |
AverageWindDirection | Average wind direction in degrees (1-360). |
AverageHorizontalVisibility | Horizontal visibility at the observation point in miles. |
AverageWindGustSpeed | Average wind gust speed in miles per hour. |
AverageSnow | Average hourly snowfall in inches. |
AveragePrecipitationTotal | Precipitation amount in the last 24 hours in inches. |
AveragePressureTendency | Change in the barometric pressure reading over the last hour: 0 = Steady, 1 = Rising or Rapidly Rising, 2 = Falling or Rapidly Falling |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/evalmetrics
Request JSON:
{
"spec": {
"ids": ["SantaClara_California_UnitedStates"],
"expressions":["AverageDailyTemperature"],
"interval":"DAY",
"start":"2020-05-01",
"end":"2020-06-01"
}
}
Response JSON:
{
"result": {
"SantaClara_California_UnitedStates": {
"AverageDailyTemperature": {
"type": "MaterializedTimeseriesDouble",
"count": 31,
"dates": [
"2020-05-01T00:00:00",
"2020-05-02T00:00:00",
"2020-05-03T00:00:00",
"2020-05-04T00:00:00",
"2020-05-05T00:00:00",
"2020-05-06T00:00:00",
"2020-05-07T00:00:00",
"2020-05-08T00:00:00",
"2020-05-09T00:00:00",
"2020-05-10T00:00:00",
"2020-05-11T00:00:00",
"2020-05-12T00:00:00",
"2020-05-13T00:00:00",
"2020-05-14T00:00:00",
"2020-05-15T00:00:00",
"2020-05-16T00:00:00",
"2020-05-17T00:00:00",
"2020-05-18T00:00:00",
"2020-05-19T00:00:00",
"2020-05-20T00:00:00",
"2020-05-21T00:00:00",
"2020-05-22T00:00:00",
"2020-05-23T00:00:00",
"2020-05-24T00:00:00",
"2020-05-25T00:00:00",
"2020-05-26T00:00:00",
"2020-05-27T00:00:00",
"2020-05-28T00:00:00",
"2020-05-29T00:00:00",
"2020-05-30T00:00:00",
"2020-05-31T00:00:00"
],
"data": [
63.666666666666664,
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"missing": [
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"unit": {
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},
"timeZone": "NONE",
"interval": "DAY",
"start": "2020-05-01T00:00:00",
"end": "2020-06-01T00:00:00"
}
}
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of time series evaluation attributes | ||||||||||
|
OK. The request has succeeded.
result | object Returned object containing time series data. | ||||||||||||||||||||||||||
|
{- "spec": {
- "ids": [
- "string"
], - "expressions": [
- "string"
], - "interval": "string",
- "start": "string",
- "end": "string"
}
}
{- "result": {
- "id": {
- "expression": {
- "type": "string",
- "count": 0,
- "dates": [
- "string"
], - "start": "string",
- "end": "string",
- "data": [
- 0
], - "missing": [
- 0
], - "interval": "string",
- "timeZone": "string"
}
}
}
}
This API returns a collection of time series, where each time series represents projections for a specific metric made at a specific point in time. GetProjectionHistory allows the comparison of different versions of these projections over time.
The following tables show the available time series metrics from each data source that can be evaluated using GetProjectionHistory. Use the expressions from the Metric column in the metric
field of the request JSON of the getprojectionhistory
API. For example, "metric": "UniversityOfWashington_AdmisMean_Hist"
.
Projections of hospital resource use and COVID-19 deaths available daily at country and province level globally.
NOTE: Most recent projections available are from June 13, 2020.
Metric | Description |
---|---|
UniversityOfWashington_AdmisMean_Hist | Mean number of hospital admissions per day |
UniversityOfWashington_AdmisLower_Hist | Lower uncertainy bound of number of hospital admissions per day |
UniversityOfWashington_AdmisUpper_Hist | Upper uncertainy bound of number of hospital admissions per day |
UniversityOfWashington_AllbedMean_Hist | Mean number of COVID-19 hospital beds needed per day |
UniversityOfWashington_AllbedLower_Hist | Lower uncertainy bound of number of COVID-19 hospital beds needed per day |
UniversityOfWashington_AllbedUpper_Hist | Upper uncertainy bound of number of COVID-19 hospital beds needed per day |
UniversityOfWashington_BedoverMean_Hist | Mean BedOver, computed as (Number of COVID-19 hospital beds needed per day - Total hospital bed capacity - Average hospital bed use) |
UniversityOfWashington_BedoverLower_Hist | Lower uncertainty bound of BedOver |
UniversityOfWashington_BedoverUpper_Hist | Upper uncertainty bound of BedOver |
UniversityOfWashington_IcubedMean_Hist | Mean number of COVID-19 ICU beds needed per day |
UniversityOfWashington_IcubedLower_Hist | Lower uncertainty bound of number of COVID-19 ICU beds needed per day |
UniversityOfWashington_IcubedUpper_Hist | Upper uncertainty bound of number of COVID-19 ICU beds needed per day |
UniversityOfWashington_IcuoverMean_Hist | Mean ICUOver, computed as (Number of COVID-19 ICU beds needed per day - Total ICU bed capacity - Average ICU bed use) |
UniversityOfWashington_IcuoverLower_Hist | Lower uncertainy bound of ICUOver |
UniversityOfWashington_IcuoverUpper_Hist | Upper uncertainy bound of ICUOver |
UniversityOfWashington_InvvenMean_Hist | Mean number of invasive ventilation procedures needed per day |
UniversityOfWashington_InvvenLower_Hist | Lower uncertainty bound of number of invasive ventilation procedures needed per day |
UniversityOfWashington_InvvenUpper_Hist | Upper uncertainty bound of number of invasive ventilation procedures needed per day |
UniversityOfWashington_NewicuMean_Hist | Mean number of new ICU admissions per day |
UniversityOfWashington_NewicuLower_Hist | Lower uncertainty bound of new ICU admissions per day |
UniversityOfWashington_NewicuUpper_Hist | Upper uncertainty bound of new ICU admissions per day |
UniversityOfWashington_DeathsMean_Hist | Mean number of COVID-19 deaths per day |
UniversityOfWashington_DeathsLower_Hist | Lower uncertainy bound of number of COVID-19 deaths per day |
UniversityOfWashington_DeathsUpper_Hist | Upper uncertainy bound of number of COVID-19 deaths per day |
UniversityOfWashington_TotdeaMean_Hist | Mean number of cumulative COVID-19 deaths |
UniversityOfWashington_TotdeaLower_Hist | Lower uncertainty bound of number of cumulative COVID-19 deaths |
UniversityOfWashington_TotdeaUpper_Hist | Upper uncertainty bound of number of cumulative COVID-19 deaths |
HTTP URL:
https://api.c3.ai/covid/api/1/outbreaklocation/getprojectionhistory
Request JSON:
{
"outbreakLocation": "Spain",
"metric": "UniversityOfWashington_TotdeaMean_Hist",
"metricStart": "2020-04-13",
"metricEnd": "2020-05-13",
"observationPeriodStart": "2020-04-13",
"observationPeriodEnd": "2020-05-01"
}
Response JSON:
{
"0": {
"type": "map<string, any>",
"value": {
"Spain": {
"type": "map<string, any>",
"value": {
"UniversityOfWashington_TotdeaMean_Hist": {
"type": "UniversityOfWashingtonProjectionResult",
"count": 30,
"dates": [
"2020-04-13T00:00:00",
"2020-04-14T00:00:00",
"2020-04-15T00:00:00",
"2020-04-16T00:00:00",
"2020-04-17T00:00:00",
"2020-04-18T00:00:00",
"2020-04-19T00:00:00",
"2020-04-20T00:00:00",
"2020-04-21T00:00:00",
"2020-04-22T00:00:00",
"2020-04-23T00:00:00",
"2020-04-24T00:00:00",
"2020-04-25T00:00:00",
"2020-04-26T00:00:00",
"2020-04-27T00:00:00",
"2020-04-28T00:00:00",
"2020-04-29T00:00:00",
"2020-04-30T00:00:00",
"2020-05-01T00:00:00",
"2020-05-02T00:00:00",
"2020-05-03T00:00:00",
"2020-05-04T00:00:00",
"2020-05-05T00:00:00",
"2020-05-06T00:00:00",
"2020-05-07T00:00:00",
"2020-05-08T00:00:00",
"2020-05-09T00:00:00",
"2020-05-10T00:00:00",
"2020-05-11T00:00:00",
"2020-05-12T00:00:00"
],
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"timeZone": "NONE",
"interval": "DAY",
"start": "2020-04-13T00:00:00",
"end": "2020-05-13T00:00:00",
"expr": "TotdeaMean Projections as of 2020-04-13"
}
}
}
}
},
"1": {
"type": "map<string, any>",
"value": {
"Spain": {
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"value": {
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"type": "UniversityOfWashingtonProjectionResult",
"count": 30,
"dates": [
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"2020-04-15T00:00:00",
"2020-04-16T00:00:00",
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"2020-04-24T00:00:00",
"2020-04-25T00:00:00",
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"2020-04-27T00:00:00",
"2020-04-28T00:00:00",
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"2020-05-08T00:00:00",
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"2020-05-10T00:00:00",
"2020-05-11T00:00:00",
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],
"data": [
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"start": "2020-04-13T00:00:00",
"end": "2020-05-13T00:00:00",
"expr": "TotdeaMean Projections as of 2020-04-17"
}
}
}
}
},
"2": {
"type": "map<string, any>",
"value": {
"Spain": {
"type": "map<string, any>",
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"type": "UniversityOfWashingtonProjectionResult",
"count": 30,
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HTTP URL:
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"metricEnd": "2020-04-15",
"observationPeriodStart": "2020-03-23",
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"2020-04-05T00:00:00",
"2020-04-06T00:00:00",
"2020-04-07T00:00:00",
"2020-04-08T00:00:00",
"2020-04-09T00:00:00",
"2020-04-10T00:00:00",
"2020-04-11T00:00:00",
"2020-04-12T00:00:00",
"2020-04-13T00:00:00",
"2020-04-14T00:00:00"
],
"data": [
1819.5625,
2443.0125,
3191.0,
4078.575,
5052.175,
6102.5375,
7239.6,
8431.9,
9716.05,
10954.5375,
12103.575,
13145.1625,
14022.3625,
14735.025,
15188.35,
15467.6625,
15417.375,
15127.1375,
14621.75,
13876.025,
13011.0875,
11917.1,
10763.275
],
"missing": [
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0,
0
],
"timeZone": "NONE",
"interval": "DAY",
"start": "2020-03-23T00:00:00",
"end": "2020-04-15T00:00:00",
"expr": "IcuoverUpper Projections as of 2020-04-01"
}
}
}
}
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
outbreakLocation | string Unique ID of the OutbreakLocation for which the metric should be evaluated, e.g. "California_UnitedStates" |
metric | string Metric to be evaluated, e.g. "UniversityOfWashington_AdmisLower_Hist" |
metricStart | string Start datetime over which the metric should be evaluated. E.g. '2020-04-01' indicates that you want to view the value of the metric beginning at '2020-04-01'. |
metricEnd | string End datetime over which the metric should be evaluated. E.g. '2020-04-30' indicates that you want to view the value of the metric ending at '2020-04-30'. |
observationPeriodStart | string Start datetime for which projection metrics to view. E.g. '2020-04-01' indicates that you want to view projections calculated after '2020-04-01'. |
observationPeriodEnd | string (Optional) End datetime for which projection metrics to view. E.g. '2020-04-30' indicates that you want to view projections calculated before '2020-04-30'. |
OK. The request has succeeded.
id | object | ||||
|
{- "outbreakLocation": "string",
- "metric": "string",
- "metricStart": "string",
- "metricEnd": "string",
- "observationPeriodStart": "string",
- "observationPeriodEnd": "string"
}
{- "id": {
- "type": "string",
- "value": {
- "location_id": {
- "type": "string",
- "value": {
- "metric_id": {
- "type": "string",
- "count": 0,
- "dates": [
- "string"
], - "data": [
- 0
], - "missing": [
- 0
], - "timeZone": "string",
- "interval": "string",
- "start": "string",
- "end": "string",
- "expr": "string"
}
}
}
}
}
}
LocationExposure stores information based on the movement of people's mobile devices across locations over time. It stores the following:
locationTarget
, locationVisited
): the fraction of mobile devices that pinged in locationTarget
on a date that also pinged in locationVisited
at least once during the previous 14 days. The pair (locationTarget
, locationVisited
) can be two county locations or two state locations.locationTarget
on the date.See more detailed description of the methodology and index definition here.
This API returns:
LocationExposure
objects in JSON format, each of which represents a LEX data point for a pair of locations on a given day;locationTarget
field specified in the parameter.To retrieve LEX values at the state level, all fields are optional. To retrieve LEX values at the county level, the locationTarget
and locationVisited
fields are required.
LEX values are available daily from January 20, 2020 through August 19, 2020 and for Wednesdays and Saturdays after August 19, 2020.
HTTP URL:
https://api.c3.ai/covid/api/1/locationexposure/getlocationexposures
Request JSON:
{
"spec": {
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"start": "2020-01-20",
"end": "2020-01-25"
}
}
Response JSON:
{
"locationExposures": {
"type": "json",
"value": [
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"timestamp": "2020-01-20T00:00:00.000Z",
"value": 0.014275999999999999
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"timestamp": "2020-01-21T00:00:00.000Z",
"value": 0.015028999999999999
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"timestamp": "2020-01-22T00:00:00.000Z",
"value": 0.014157
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"timestamp": "2020-01-23T00:00:00.000Z",
"value": 0.013359000000000001
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"locationVisited": "Clark_Nevada_UnitedStates",
"timestamp": "2020-01-24T00:00:00.000Z",
"value": 0.014417
}
]
},
"deviceCounts": {
"type": "json",
"value": [
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"timestamp": "2020-01-20T00:00:00.000Z",
"value": 27738.0
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"timestamp": "2020-01-21T00:00:00.000Z",
"value": 34867.0
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"timestamp": "2020-01-22T00:00:00.000Z",
"value": 35460.0
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"timestamp": "2020-01-23T00:00:00.000Z",
"value": 35033.0
},
{
"locationTarget": "SanFrancisco_California_UnitedStates",
"timestamp": "2020-01-24T00:00:00.000Z",
"value": 34472.0
}
]
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/locationexposure/getlocationexposures
Request JSON:
{
"spec": {
"locationTarget": "California_UnitedStates",
"start": "2020-06-01",
"end": "2020-06-02"
}
}
Response JSON:
{
"locationExposures": {
"type": "json",
"value": [
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Arizona_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.021019
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "RhodeIsland_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 7.099999999999999E-5
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Hawaii_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 1.96E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Nevada_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.018249
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Delaware_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 1.0800000000000001E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Connecticut_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 2.8700000000000004E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "DistrictofColumbia_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 8.1E-5
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Idaho_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001966
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NorthDakota_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 1.82E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Vermont_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 3.6E-5
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Oregon_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.0061979999999999995
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Virginia_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001052
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Arkansas_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.0015
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Indiana_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001734
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Montana_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 5.8E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "California_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.9972110000000001
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Illinois_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.002739
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Florida_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001376
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Wyoming_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001715
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "SouthDakota_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 3.28E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Pennsylvania_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001351
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Iowa_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001347
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Wisconsin_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.65E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Louisiana_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 9.98E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Michigan_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.24E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Minnesota_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.76E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Tennessee_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.0018629999999999999
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Nebraska_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.0015539999999999998
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Oklahoma_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.002665
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "SouthCarolina_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.95E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Mississippi_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 9.480000000000001E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Maryland_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 5.56E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NewYork_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 8.97E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NewJersey_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 8.730000000000001E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Missouri_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.002226
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "WestVirginia_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 3.09E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NewMexico_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.004255
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Alabama_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001059
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NorthCarolina_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001403
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Washington_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.002957
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Maine_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.8E-5
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Massachusetts_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 3.49E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Kansas_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001132
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "NewHampshire_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 1.1100000000000001E-4
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Georgia_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001556
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Utah_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.005227000000000001
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Ohio_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.001568
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Texas_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.006821
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Colorado_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 0.003041
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Alaska_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 6.8E-5
},
{
"locationTarget": "California_UnitedStates",
"locationVisited": "Kentucky_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 8.69E-4
}
]
},
"deviceCounts": {
"type": "json",
"value": [
{
"locationTarget": "California_UnitedStates",
"timestamp": "2020-06-01T00:00:00.000Z",
"value": 1302856.0
}
]
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object | ||||||||
|
OK. The request has succeeded.
result | object Returned object containing LEX and device counts. | ||||
|
{- "spec": {
- "locationTarget": "string",
- "locationVisited": "string",
- "start": "string",
- "end": "string"
}
}
{- "result": {
- "deviceCounts": [
- {
- "locationTarget": "string",
- "timestamp": "string",
- "value": null
}
], - "locationExposures": [
- {
- "locationTarget": "string",
- "locationVisited": "string",
- "timestamp": "string",
- "value": null
}
]
}
}
PopulationData stores historical population measurements and estimates by age and gender for countries (using World Bank data and US Census Bureau: International Census), US counties and states (using US Census Bureau data). It also includes country-level population projections from US Census Bureau: International Census.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
parent | OutbreakLocation | C3.ai Type OutbreakLocation affiliated with this population value. |
year | int | Year population estimate was taken, between 2010-2019 for US Census data, and between 1960-2018 for World Bank data. |
populationAge | string | Age range for the population estimate. Allowed values: Total , Median , <5 , 5 - 9 , 5 - 13 , 10 - 14 , 14 -17 , 15 - 19 , 15 - 44 , 18 - 24 , 18 - 64 , 20 - 24 , 25 - 29 , 25 - 44 , 30 - 34 , 35 - 39 , 40 - 44 , 45 - 49 , 45 - 64 , 50 - 54 , 55 - 59 , 60 -64 , 65 - 69 , 70 - 74 , 75 - 79 , 80 - 84 , >=16 , >=18 , >=65 , >=85 Also allowed for US Census Bureau: International Census: 0 , 1 , 2 , ..., 100 . |
gender | string | Gender of the population estimate. Allowed values: Male/Female , Male , Female . |
race | string | Race characteristic of the population estimate. Allowed values: White alone , Black or African American alone , American Indian and Alaska Native alone , Asian alone , Native Hawaiian and Other Pacific Islander alone , Two or More Races , White alone or in combination , Black or African American alone or in combination , American Indian and Alaska Native alone or in combination , Asian alone or in combination , Native Hawaiian and Other Pacific Islander alone or in combination , Any race . |
ethnicity | string | Ethnicity characteristic of the population estimate. Allowed values: Hispanic , Not Hispanic , Hispanic/Not Hispanic . |
estimate | boolean | True if the population value is an estimate based on the American Housing Survey, false otherwise. |
median | boolean | True if the value is the median age of all individuals in the location, false if the value is a population count. |
value | double | Population count, or median age if median is true . |
minAge | int | Lower limit of the population age range. |
maxAge | int | Upper limit of the population age range. |
origin | string | The source of the population data. Allowed values: International Census Bureau , United States Census , World Bank |
The following examples show how to use this API.
HTTP URL:
https://api.c3.ai/covid/api/1/populationdata/fetch
Request JSON:
{
"spec": {
"filter": "contains(parent, 'UnitedStates') && (populationAge == '>=65' || populationAge == 'Total') && gender == 'Male/Female' && year == 2010 && estimate == 'False'",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"year": 2010,
"gender": "Male/Female",
"populationAge": ">=65",
"estimate": false,
"median": false,
"value": 4203,
"minAge": 65,
"id": "2010_Abbeville_SouthCarolina_UnitedStates_Male/Female_>=65_Census_PopulationCount",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-30T01:45:45Z",
"createdBy": "dataloader",
"updated": "2020-04-30T01:45:45Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-30T02:23:25Z",
"sourceFile": "flattenedCensusData.csv",
"fetchInclude": "[]",
"fetchType": "PopulationData"
},
"version": 1,
"parent": {
"id": "Abbeville_SouthCarolina_UnitedStates"
},
"timestamp": "2010-01-01T00:00:00Z"
},
{
"year": 2010,
"gender": "Male/Female",
"populationAge": "Total",
"estimate": false,
"median": false,
"value": 25417,
"id": "2010_Abbeville_SouthCarolina_UnitedStates_Male/Female_Total_Census_PopulationCount",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-30T01:45:45Z",
"createdBy": "dataloader",
"updated": "2020-04-30T01:45:45Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-30T02:23:25Z",
"sourceFile": "flattenedCensusData.csv",
"fetchInclude": "[]",
"fetchType": "PopulationData"
},
"version": 1,
"parent": {
"id": "Abbeville_SouthCarolina_UnitedStates"
},
"timestamp": "2010-01-01T00:00:00Z"
},
{
"year": 2010,
"gender": "Male/Female",
"populationAge": ">=65",
"estimate": false,
"median": false,
"value": 7886,
"minAge": 65,
"id": "2010_Acadia_Louisiana_UnitedStates_Male/Female_>=65_Census_PopulationCount",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-30T01:45:45Z",
"createdBy": "dataloader",
"updated": "2020-04-30T01:45:45Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-30T02:10:34Z",
"sourceFile": "flattenedCensusData.csv",
"fetchInclude": "[]",
"fetchType": "PopulationData"
},
"version": 1,
"parent": {
"id": "Acadia_Louisiana_UnitedStates"
},
"timestamp": "2010-01-01T00:00:00Z"
},
...
],
"count": 6470,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/populationdata/fetch
Request JSON:
{
"spec": {
"filter": "contains(parent, 'Canada') && (populationAge == '75-79') && gender == 'Female' && year(timestamp) == 2040 && origin == 'International Census Bureau'",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"gender": "Female",
"populationAge": "75-79",
"estimate": false,
"percent": false,
"value": 1206279.0,
"minAge": 75,
"maxAge": 79,
"origin": "International Census Bureau",
"id": "2040_Canada_75To79_MidyearFemalePopulation",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-04T04:37:54Z",
"createdBy": "dataloader",
"updated": "2020-06-04T04:37:54Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-04T06:59:22Z",
"sourceFile": "midyear_populations_5yr_age_sex.csv",
"fetchInclude": "[]",
"fetchType": "PopulationData"
},
"version": 1,
"parent": {
"id": "Canada"
},
"timestamp": "2040-06-01T00:00:00Z"
}
],
"count": 1,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
LaborDetail stores historical monthly labor force and employment data for the US counties and states from US Bureau of Labor Statistics.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
parent | OutbreakLocation | C3.ai Type OutbreakLocation affiliated with this employment statistic. |
year | int | Year the labor statistics was taken, between 2000 to 2020. |
month | int | Month the labor statistics was taken. |
laborForce | int | Civilian labor force population. |
employedPopulation | int | Civilian noninstitutional population aged 16 years and over that is employed. |
unemployedPopulation | int | Number of civilians aged 16 years or older who: had no employment during the reference week, were available for work, except for temporary illness, and had made specific efforts to find employment sometime during the 4-week period ending with the reference week. |
unemploymentRate | double | Unemployed population divided by labor force population, in percent. |
origin | string | The source of the labor data. Allowed values: BLS . |
The following example shows how to use this API.
HTTP URL:
https://api.c3.ai/covid/api/1/labordetail/fetch
Request JSON:
{
"spec": {
"filter": "year == 2020 && month == 3 && contains(parent, 'California_UnitedStates')",
"include": "unemploymentRate",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"unemploymentRate": 3.91542181365508,
"id": "2020_03_Alameda_California_UnitedStates",
"meta": {
"fetchInclude": "[unemploymentRate,id,version]",
"fetchType": "LaborDetail"
},
"version": 1
},
{
"unemploymentRate": 7.3584905660377355,
"id": "2020_03_Alpine_California_UnitedStates",
"meta": {
"fetchInclude": "[unemploymentRate,id,version]",
"fetchType": "LaborDetail"
},
"version": 1
},
{
"unemploymentRate": 5.476673427991886,
"id": "2020_03_Amador_California_UnitedStates",
"meta": {
"fetchInclude": "[unemploymentRate,id,version]",
"fetchType": "LaborDetail"
},
"version": 1
},
{
"unemploymentRate": 6.83884902251693,
"id": "2020_03_Butte_California_UnitedStates",
"meta": {
"fetchInclude": "[unemploymentRate,id,version]",
"fetchType": "LaborDetail"
},
"version": 1
},
{
"unemploymentRate": 5.496396186933271,
"id": "2020_03_Calaveras_California_UnitedStates",
"meta": {
"fetchInclude": "[unemploymentRate,id,version]",
"fetchType": "LaborDetail"
},
"version": 1
},
...
],
"count": 116,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
LineListRecord stores individual-level crowdsourced information from laboratory-confirmed COVID-19 patients. Information includes gender, age, symptoms, travel history, location, reported onset, confirmation dates, and discharge status.
NOTE: LineListRecord data are available through April 30, 2020.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
location | OutbreakLocation | C3.ai Type OutbreakLocation. |
locationType | string | Specific location where the individual was assessed. For example: Yokohama Port, National Centre for Infectious Diseases. |
isGroundZero | boolean | Is the patient located in Wuhan? Allowed values: true , false . |
livesInGroundZero | boolean | Does the patient live in Wuhan? Allowed values: true , false . |
traveledToGroundZero | boolean | Did the patient travel to Wuhan? Allowed values: true , false . |
relevantTravelHistoryLocation | string | Details of patient travel history including locations travelled. |
recordSource | string | Public source from which this patient information collected. |
gender | string | Gender of the patient. Allowed values: male , female , other . |
age | int | Age of the patient. |
ageRange | string | Age range, if age is provided as age range. |
groundZeroExposure | string | Description regarding whether the individual had exposure to the Wuhan marketplace. |
chronicDisease | string | Medical history of chronic disease symptoms. |
symptomStartDate | datetime | Date COVID-19 symptoms appeared. |
exposureStartDate | datetime | Date COVID-19 exposure started. |
exposureEndDate | datetime | Date COVID-19 exposure ended. |
caseConfirmationDate | datetime | Date the case was confirmed. |
symptoms | string | Description of the symptoms. |
caseConfirmationDate | datetime | Date of the confirmation of the case. |
caseInCountry | int | Ordinal number indicating whether this case is, e.g., 20th or 32nd, in that country. |
hospitalAdmissionDate | datetime | Date admitted to hospital. |
relevantTravelHistoryDates | string | Dates when the patient travelled in recent past. |
outcome | string | Outcome of the treatment. Allowed values: stable , discharge , death , "" (null value). |
didDie | boolean | Did patient die? Allowed values: true , false . |
didRecover | boolean | Did patient recover? Allowed values: true , false . |
outcomeDate | datetime | Date of the outcome. |
traveler | boolean | Whether the patient is a local resident or a traveler to the location. |
internationTraveler | boolean | Whether the patient is an international traveler. |
domesticTraveler | boolean | Whether the patient is an domestic traveler. |
notes | string | Clinical notes. |
infectedBy | LineListRecord | C3.ai Type LineListRecord that represents the record of the patient who infected this patient. Available for LineListRecord data from the Data Science for COVID-19: South Korea Dataset. |
contactNumber | int | The number of the patient's contacts with people. Available for LineListRecord data from the Data Science for COVID-19: South Korea Dataset. |
hospitalReleaseDate | datetime | Date the patient is released from the hospital. Available for LineListRecord data from the Data Science for COVID-19: South Korea Dataset. |
deceasedDate | datetime | Date of death. Available for LineListRecord data from the Data Science for COVID-19: South Korea Dataset. |
infectionOrder | int | Order of infection. Possible values: 1 : patient infected in Wuhan; 2 : patient infected was from the one whose infection order is 1; 3 : patient infected was from the one whose infection order is 2. |
travelHistory | PatientRoute | List of C3.ai Type PatientRoute objects associated with this patient record. |
hasTravelHistory | boolean | Whether the patient has any associated PatientRoute data. |
lineListSource | string | Data source for the crowdsourced line list records. Allowed values: OPEN (nCoV2019 Data Working Group), DXY (MOBS Lab). |
The following examples show how to use this API.
HTTP URL:
https://api.c3.ai/covid/api/1/linelistrecord/fetch
Request JSON:
{
"spec": {
"filter": "gender == 'male' && lineListSource == 'OPEN' && age <= 20 && contains(relevantTravelHistoryLocation,'Wuhan')"
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "GuidingCountyQiannanPrefecture_Guizhou_China"
},
"age": 20,
"gender": "male",
"symptoms": "discomfort",
"symptomStartDate": "2020-01-18T00:00:00Z",
"hospitalAdmissionDate": "2020-01-18T00:00:00Z",
"caseConfirmationDate": "2020-01-22T00:00:00Z",
"isGroundZero": false,
"livesInGroundZero": false,
"traveledToGroundZero": false,
"relevantTravelHistoryLocation": "Wuhan",
"notes": "student in a college in Wuhan",
"lineListSource": "OPEN",
"id": "0017f762-239b-440b-94db-e66bd08d516f",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-03T11:46:38Z",
"createdBy": "dataloader",
"updated": "2020-04-03T11:46:38Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-03T11:53:40Z",
"sourceFile": "COVID19CanonicalOpenLineList.csv",
"fetchInclude": "[]",
"fetchType": "LineListRecord"
},
"version": 1
},
...
}
HTTP URL:
https://api.c3.ai/covid/api/1/linelistrecord/fetch
Request JSON:
{ // By default the first 2000 records are returned if no "limit" is specified.
"spec": {
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/linelistrecord/fetch
Request JSON:
{ // See the `lineListSource` field for allowed values in the table of fields. By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "lineListSource == 'OPEN'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/linelistrecord/fetch
Request JSON:
{ // See the `lineListSource` field for allowed values in the table of fields. By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "lineListSource == 'DXY'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/linelistrecord/fetch
Request JSON:
{ // See the `lineListSource` field for allowed values in the table of fields. By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "gender == 'male' && lineListSource == 'DXY'"
}
}
import requests
import pandas as pd
def read_data(url, body):
has_more = True
body['spec']['offset'] = 0
df = pd.DataFrame()
while has_more:
print(body['spec']['offset'])
response = requests.post(
url,
json = body,
headers = {'Accept' : 'application/json'}
)
new_df = pd.json_normalize(response.json()['objs'])
df = df.append(new_df)
has_more = response.json()['hasMore']
body['spec']['offset'] += new_df.shape[0]
return df
url = 'https://api.c3.ai/covid/api/1/linelistrecord/fetch'
payload = {
"spec": {
"filter": "exists(hospitalAdmissionDate)",
"include": "caseConfirmationDate, outcomeDate, hospitalAdmissionDate, age"
}
}
read_data(url, payload)
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
PatientRoute records all locations (e.g. hospitals, stores, restaurants) visited by COVID-19 patients in South Korea over time.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
parent | LineListRecord | C3.ai Type LineListRecord representing the patient. |
location | OutbreakLocation | C3.ai Type OutbreakLocation of the patient visit. |
locationType | string | Type of location visited by the patient. Examples include hospital , airport , bakery , and post_office . |
coordinate | LatLong | C3.ai Type LatLong representing latitude and longitude of location. |
timestamp | datetime | Date when the patient visited the location. |
HTTP URL:
https://api.c3.ai/covid/api/1/patientroute/fetch
Request JSON:
{
"spec": {
"filter": "contains(location, 'Seoul_KoreaSouth')",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Gangbuk-gu_Seoul_KoreaSouth"
},
"locationType": "etc",
"coordinates": {
"latitude": 37.63886,
"longitude": 127.0231577
},
"id": "00091b82-3916-4915-81d4-6d71c30642c5",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:37:57Z",
"createdBy": "dataloader",
"updated": "2020-05-05T04:37:57Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-05T04:54:46Z",
"fetchInclude": "[]",
"fetchType": "PatientRoute"
},
"version": 1,
"parent": {
"id": "1000000111"
},
"timestamp": "2020-02-22T00:00:00Z"
},
...
],
"count": 1384,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/patientroute/fetch
Request JSON:
{
"spec": {
"filter": "coordinates.latitude > 37.58 && coordinates.latitude < 37.59 && coordinates.longitude > 127.05 && coordinates.latitude < 127.07",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Dongdaemun-gu_Seoul_KoreaSouth"
},
"locationType": "hospital",
"coordinates": {
"latitude": 37.5878949,
"longitude": 127.0653215
},
"id": "0b492523-f776-4021-9739-3cdd86b95cae",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:37:57Z",
"createdBy": "dataloader",
"updated": "2020-05-05T04:37:57Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-05T04:54:46Z",
"fetchInclude": "[]",
"fetchType": "PatientRoute"
},
"version": 1,
"parent": {
"id": "1000000040"
},
"timestamp": "2020-02-25T00:00:00Z"
},
...
],
"count": 15,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/patientroute/fetch
Request JSON:
{
"spec": {
"filter": "parent.id == '1000000231' && locationType == 'store'",
"include": "this, parent.outcome"
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Yeongdong-gun_Chungcheongbuk-do_KoreaSouth"
},
"locationType": "store",
"coordinates": {
"latitude": 36.1727531,
"longitude": 127.7737169
},
"id": "08461a81-6589-44d7-9544-9a557217128d",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:37:57Z",
"createdBy": "dataloader",
"updated": "2020-05-05T04:37:57Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-05T04:54:46Z",
"fetchInclude": "[this,{parent:[outcome,id]}]",
"fetchType": "PatientRoute"
},
"version": 1,
"parent": {
"outcome": "released",
"id": "1000000231"
},
"timestamp": "2020-02-27T00:00:00Z"
},
...
],
"count": 11,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
BiologicalAsset stores the metadata of the genome sequences collected from SARS-CoV-2 samples in the National Center for Biotechnology Information Virus Database. See also Sequence.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Genome sequence ID. |
assetType | string | Biological molecule type. Allowed values: protein sequence , nucleotide sequence . |
genus | string | Genus. Allowed values: Betacoronavirus . |
family | string | Family. Allowed values: Coronaviridae . |
species | string | The species that the BiologicalAsset relates to. |
authors | string | Individuals cited as source of genome sequences. |
genBankTitle | string | Sequence description in the National Center for Biotechnology Information Virus Database. |
publications | string | Public source from which this patient information collected. |
name | string | Name of the patient. |
location | OutbreakLocation | C3.ai Type OutbreakLocation. |
sequence | Sequence | C3.ai Type Sequence. |
nucleotideCompleteness | string | The completeness of thie BiologicalAsset, available if the asset is a nucleotide. |
sequenceType | string | The type of sequence this represents. Possible values: GenBank and RefSeq . |
bioSample | string | Name of the sample from which this asset is found. |
host | string | The host organism from which the sample was taken. Allowed values: Homo sapiens . |
isolationSource | string | Source from which the sample was taken. Allowed values: oronasopharynx , blood , feces , lung , swab , lung, oronasopharynx . |
collectionDate | datetime | Date when samples were collected. |
The following examples show how to use this API.
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"filter": "assetType == 'protein sequence'",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"filter": "assetType == 'nucleotide sequence'",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"filter": "isolationSource == 'blood'",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biologicalasset/fetch
Request JSON:
{
"spec": {
"filter": "isolationSource == 'feces' && location == 'Japan'",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Japan"
},
"sequence": {
"id": "AB889995"
},
"assetType": "nucleotide sequence",
"host": "Rhinolophus cornutus",
"species": "Severe acute respiratory syndrome-related coronavirus",
"genus": "Betacoronavirus",
"family": "Coronaviridae",
"isolationSource": "feces",
"authors": "Suzuki,J., Sato,R., Kobayashi,T., Aoi,T., Harasawa,R.",
"genBankTitle": "SARS bat coronavirus RdRp gene for RNA dependent RNA polymerase, partial cds, strain: Is39",
"collectionDate": "2013-01-01T00:00:00Z",
"id": "AB889995",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-02T03:39:44Z",
"createdBy": "dataloader",
"updated": "2020-04-02T03:39:44Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-02T03:39:50Z",
"sourceFile": "nucleotide_sequence_metadata.csv",
"fetchInclude": "[]",
"fetchType": "BiologicalAsset"
},
...
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
Sequence stores the genome sequences collected from SARS-CoV-2 samples in the National Center for Biotechnology Information Virus Database. See also BiologicalAsset.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Genome sequence ID. |
parent | BiologicalAsset | C3.ai Type BiologicalAsset. |
sequence | string | Actual genomic sequence. Should be in uppercase. |
sequenceType | string | Biological molecule type. Allowed values: protein , complete , partial , GenBank . |
length | int | Length of the sequence, as in length(sequence) . |
HTTP URL:
https://api.c3.ai/covid/api/1/sequence/fetch
Request JSON:
{
"spec": {
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/sequence/fetch
Request JSON:
{
"spec": {
"filter": "sequenceType == 'protein'",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/sequence/fetch
Request JSON:
{
"spec": {
"filter": "sequenceType == 'complete'",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/sequence/fetch
Request JSON:
{
"spec": {
"filter": "length <= 100",
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/sequence/fetch
Request JSON:
{
"spec": {
"filter": "id == '5R7Y_A'"
}
}
Response JSON:
{
"objs": [
{
"parent": {
"id": "5R7Y_A"
},
"sequence": "SGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYCPRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLKLKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKGSFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDRQTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYNYEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLEDEFTPFDVVRQCSGVTFQ",
"sequenceType": "protein",
"length": 306,
"id": "5R7Y_A",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-02T00:37:16Z",
"createdBy": "dataloader",
"updated": "2020-04-02T00:37:16Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-02T16:54:53Z",
"sourceFile": "protein_sequences.csv",
"fetchInclude": "[]",
"fetchType": "Sequence"
},
"version": 65537
}
],
"count": 1,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
Subsequence stores indices of critical segments within a nucleotide or amino acid sequence, e.g., introns, exons, and proteins. Indices are 1-indexed.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
parent | Sequence | The Sequence this Subsequence references. |
startIndex | int | The position where the value of this Subsequence begins in relation to the parent's sequence. |
endIndex | int | The position where the second value of this Subsequence ends in relation to the parent's sequence. |
secondStartIndex | int | The position where the second value of this Subsequence begins in relation to the parent's sequence, for the second subsequence. Available only if this Subsequence is a join of two substrings. |
secondEndIndex | int | The position where the second value of this Subsequence ends in relation to the parent's sequence, for the second subsequence. Available only if this Subsequence is a join of two substrings. |
value | string | The value of this Subsequence code substring. If this Subsequence is a join of two substrings, then this field is the concatenation of both substrings. |
HTTP URL:
https://api.c3.ai/covid/api/1/subsequence/fetch
Request JSON:
{
"spec": {
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/subsequence/fetch
Request JSON:
{
"spec": {
"filter": "parent == 'MN975266'"
}
}
Response JSON:
{
"objs": [
{
"parent": {
"id": "MN975266"
},
"startIndex": 1,
"endIndex": 107,
"id": "1-107",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-03T15:27:09Z",
"createdBy": "dataloader",
"updated": "2020-04-09T03:15:03Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-09T03:15:06Z",
"sourceFile": "sequences_coding_region.csv",
"fetchInclude": "[]",
"fetchType": "Subsequence"
},
"version": 14
}
],
"count": 1,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
AminoAcidLookup contains the lookup table to map the IUPAC Amino Acid Codes to their full names and abbreviations.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | The IUPAC Code. |
name | string | Full name of the amino acid. |
abbreviation | string | Three-letter abbreviation of the amino acid. |
HTTP URL:
https://api.c3.ai/covid/api/1/aminoacidlookup/fetch
Request JSON:
{
"spec": {
}
}
Response JSON:
{
"objs": [
{
"abbreviation": "ala",
"id": "A",
"name": "alanine",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-03-31T16:05:46Z",
"createdBy": "provisioner",
"updated": "2020-03-31T16:05:46Z",
"updatedBy": "provisioner",
"timestamp": "2020-03-31T16:05:46Z",
"fetchInclude": "[]",
"fetchType": "AminoAcidLookup"
},
"version": 1
},
...
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
NucleotideLookup contains the lookup table to map the IUPAC Nucleotide Codes to their full names and abbreviations.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | The IUPAC Code. |
name | string | Full name of the nucleotide. |
abbreviation | string | Three-letter abbreviation of the nucleotide. |
HTTP URL:
https://api.c3.ai/covid/api/1/nucleotidelookup/fetch
Request JSON:
{
"spec": {
}
}
Response JSON:
{
"objs": [
{
"id": "A",
"name": "adenine",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-03-31T16:05:46Z",
"createdBy": "provisioner",
"updated": "2020-03-31T16:05:46Z",
"updatedBy": "provisioner",
"timestamp": "2020-03-31T16:05:46Z",
"fetchInclude": "[]",
"fetchType": "NucleotideLookup"
},
"version": 1
},
...
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
BiblioEntry stores the metadata about the journal articles in the CORD-19 Dataset.
The fetch
API provides tabular journal article data, while the getarticlemetadata
API provides full-text articles in JSON.
NOTE: Journal articles from CORD-19 are available through April 8, 2020. Additional journal articles will be made available soon.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Journal article ID. |
sha | string | ID that links the BiblioEntry to a JSON file containing the journal article's full text. |
source | string | The database from which the journal article is sourced. Allowed values: Elsevier , biorxiv , CZI , medrxiv , PMC , WHO . |
title | string | Title of the journal article. |
doi | datetime | Journal article's BioRxiv/MedRxiv ID. |
pmcid | string | Journal article's PMC ID. |
pubmedId | string | Journal article's PubMed ID. |
license | string | Journal article's license. Allowed values: biorxiv , els-covid , medrvix , cc-by , cc-by-nc , cc-by-nc-nd , cc-by-nc-sa , cc-by-nd , cc-by-sa , cc0 , pd . |
abstractText | string | Journal article's abstract text. |
publishTime | datetime | Date the journal article was published. |
authors | string | List of journal article's authors. |
journal | string | Journal which published the article. |
url | string | The URL of the article. |
idMsftPaper | string | Journal article's Microsoft Academic Paper ID. |
whoCovidence | string | Journal article's WHO ID. |
hasFullText | boolean | Is the JournalArticle's full text available in the dataset? Allowed values: true , false . |
fullTextFile | string | The type of the journal article. Allowed values: custom_license , comm_use_subset , biorxiv_medrxiv , noncomm_use_subset . |
HTTP URL:
https://api.c3.ai/covid/api/1/biblioentry/fetch
Request JSON:
{ // By default the first 2000 records are returned if no "limit" is specified.
"spec": {
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biblioentry/fetch
Request JSON:
{ // By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "hasFullText == true"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/biblioentry/fetch
Request JSON:
{ // By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "fullTextFile == 'comm_use_subset'"
}
}
Response JSON:
{
"objs": [
{
"sha": "3442b139e80c8351c89a9398709090db63edb8fe",
"source": "PMC",
"title": "Seroprevalence of Rodent Pathogens in Wild Rats from the Island of St. Kitts, West Indies",
"doi": "10.3390/ani9050228",
"pmcid": "PMC6562389",
"pubmedId": "31083284.0",
"license": "cc-by",
"abstractText": "SIMPLE SUMMARY: The role of rodents in the transmission of many diseases is widely known. Wild rats abundant in urban environments may transmit diseases to humans and other animals, including laboratory rodents used for biomedical research in research facilities, possibly compromising research data. In order to gather information about the various diseases present around such facilities, it is important to conduct routine surveillance of wild rodents in the area. In this pilot study, we surveyed 22 captured wild rats (Rattus norvegicus and Rattus rattus) from the Caribbean island of St. Kitts for 19 microorganisms. Information gained from such surveillance data would be beneficial in assessing regional public health risks and when implementing routine laboratory rodent health monitoring protocols. ABSTRACT: A pilot seroprevalence study was conducted to document exposure to selected pathogens in wild rats inhabiting the Caribbean island of St. Kitts. Serum samples collected from 22 captured wild rats (Rattus norvegicus and Rattus rattus) were tested for the presence of antibodies to various rodent pathogens using a rat MFI2 serology panel. The samples were positive for cilia-associated respiratory bacillus (13/22; 59.1%), Clostridium piliforme (4/22; 18.2%), Mycoplasma pulmonis (4/22; 18.2%), Pneumocystis carinii (1/22; 4.5%), mouse adenovirus type 2 (16/22; 72.7%), Kilham rat virus (15/22; 68.2%), reovirus type 3 (9/22; 40.9%), rat parvovirus (4/22; 18.2%), rat minute virus (4/22; 18.2%), rat theilovirus (2/22; 9.1%), and infectious diarrhea of infant rats strain of group B rotavirus (rat rotavirus) (1/22; 4.5%). This study provides the first evidence of exposure to various rodent pathogens in wild rats on the island of St. Kitts. Periodic pathogen surveillance in the wild rat population would be beneficial in assessing potential regional zoonotic risks as well as in enhancing the current knowledge when implementing routine animal health monitoring protocols in facilities with laboratory rodent colonies.",
"publishTime": "2019-05-10T00:00:00",
"authors": "Boey, Kenneth; Shiokawa, Kanae; Avsaroglu, Harutyun; Rajeev, Sreekumari",
"journal": "Animals (Basel)",
"hasFullText": true,
"fullTextFile": "comm_use_subset",
"url": "https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6562389/",
"id": "000q5l5n",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T08:10:47Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T08:10:47Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T08:10:47Z",
"fetchInclude": "[]",
"fetchType": "BiblioEntry"
},
"version": 1
},
...
}
HTTP URL:
https://api.c3.ai/covid/api/1/biblioentry/fetch
Request JSON:
{ // By default the first 2000 records are returned if no "limit" is specified.
"spec": {
"filter": "source == 'PMC' && license == 'cc-by' && hasFullText == true"
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
This API returns the full-text, in JSON, of journal articles from the CORD-19 dataset.
HTTP URL:
https://api.c3.ai/covid/api/1/biblioentry/getarticlemetadata
Request JSON:
{
"ids": ["02lsd9p6"] // list of "id" fields in BiblioEntry C3.ai Type.
}
Response JSON:
{
"value": {
"value": [
{
"paper_id": "638a64df0b44b94562271c191fa0e45933459000",
"metadata": {
"title": "Eff ects of smoking and solid-fuel use on COPD, lung cancer, and tuberculosis in China: a time-based, multiple risk factor, modelling study",
"authors": [
{
"first": "Hsien-Ho",
"middle": [],
"last": "Lin",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Megan",
"middle": [],
"last": "Murray",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Ted",
"middle": [],
"last": "Cohen",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Caroline",
"middle": [],
"last": "Colijn",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Majid",
"middle": [],
"last": "Ezzati",
"suffix": "",
"affiliation": {},
"email": ""
}
]
},
"abstract": [
{
"text": "Background Chronic obstructive pulmonary disease (COPD), lung cancer, and tuberculosis are three leading causes of death in China, where prevalences of smoking and solid-fuel use are also high. We aimed to predict the eff ects of risk-factor trends on COPD, lung cancer, and tuberculosis.",
"cite_spans": [],
"ref_spans": [],
"section": "Abstract"
},
{
"text": "We used representative data sources to estimate past trends in smoking and household solid-fuel use and to construct a range of future scenarios. We obtained the aetiological eff ects of risk factors on diseases from meta-analyses of epidemiological studies and from large studies in China. We modelled future COPD and lung cancer mortality and tuberculosis incidence, taking into account the accumulation of hazardous eff ects of risk factors on COPD and lung cancer over time, and dependency of the risk of tuberculosis infection on the prevalence of disease. We quantifi ed the sensitivity of our results to methods and data choices.",
"cite_spans": [],
"ref_spans": [],
"section": "Abstract"
},
{
"text": "Complete cessation of smoking and solid-fuel use by 2033 would reduce the projected annual tuberculosis incidence in 2033 by 14-52% if 80% DOTS coverage is sustained, 27-62% if 50% coverage is sustained, or 33-71% if 20% coverage is sustained.",
"cite_spans": [],
"ref_spans": [],
"section": "Abstract"
},
{
"text": "Interpretation Reducing smoking and solid-fuel use can substantially lower predictions of COPD and lung cancer burden and would contribute to eff ective tuberculosis control in China.",
"cite_spans": [],
"ref_spans": [],
"section": "Abstract"
}
],
"body_text": [
{
"text": "Chronic obstructive pulmonary disease (COPD), lung cancer, and tuberculosis are the second, sixth, and eighth leading causes of death in China, accounting for almost 2 million deaths in 2002 (20·5% of all deaths in China). 1 A half of Chinese men smoke and more than 70% of Chinese households use solid fuels, such as wood, crop residues, and coal for heating and cooking. 2 Tobacco smoking and indoor air pollution from solid-fuel use are the most important global risk factors for COPD and lung cancer and account for a signifi cant proportion of deaths from these diseases in developing countries. 3, 4 Without interventions, the annual numbers of COPD and lung cancer deaths in China are predicted to double over the next 30 years. 1 Systematic reviews have concluded that smoking is also an independent risk factor for tuberculosis [5] [6] [7] and suggested a positive association between indoor air pollution and the disease. 5 Integrated programmes that incorporate multiple risk factor and therapeutic interventions are a potentially eff ective way to target the cluster of respiratory diseases that share common risks. 8 Planning integrated programmes for respiratory diseases and risk factors requires quantitative estimates of how future COPD, lung cancer, and tuberculosis will be aff ected by trends in smoking and indoor air pollution. Estimating the eff ects of smoking and indoor air pollution on COPD and lung cancer requires incorporation of how fast risk accumulates after initiation, or reverses after cessation. Smoking and indoor air pollution also infl uence the dynamics of tuberculosis, both via direct eff ect in exposed individuals, and indirect eff ect in unexposed individuals through infectious source cases.",
"cite_spans": [
{
"start": 601,
"end": 603,
"text": "3,",
"ref_id": null
},
{
"start": 604,
"end": 605,
"text": "4",
"ref_id": null
},
{
"start": 837,
"end": 840,
"text": "[5]",
"ref_id": "BIBREF1"
},
{
"start": 841,
"end": 844,
"text": "[6]",
"ref_id": "BIBREF2"
},
{
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"text": "[7]",
"ref_id": "BIBREF3"
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{
"start": 932,
"end": 933,
"text": "5",
"ref_id": "BIBREF1"
},
{
"start": 1128,
"end": 1129,
"text": "8",
"ref_id": "BIBREF4"
}
],
"ref_spans": [],
"section": "Introduction"
},
{
"text": "We provide a systematic assessment of the future trends of these three leading communicable and non-communicable respiratory diseases in China that share smoking and indoor air pollution as risk factors. These results quantify the potential benefi ts of programmes that target one or more of these risk factors or disease outcomes.",
"cite_spans": [],
"ref_spans": [],
"section": "Introduction"
},
{
"text": "To estimate the proportional eff ects of future smoking and solid-fuel use on projected lung cancer and COPD mortality, we used a generalised version of the population attributable fraction (PAF) relationship: P t,i =proportion of population in the i th exposure category at time t in one future exposure scenario. We used the scenario of constant exposure as the baseline to which all other scenarios were compared. P´t ,i =proportion of population in the i th exposure category at time t in an alternative future scenario. RR t,i =relative risk of disease-specifi c mortality for the i th exposure category at time t. n=number of exposure categories. The exposure categories include continuously exposed, non-exposed, as well as those whose exposure began or stopped at diff erent times during the analysis.",
"cite_spans": [],
"ref_spans": [],
"section": "Analytical models"
},
{
"text": "PAF estimates the proportional reduction in disease or death that would occur if the observed exposure to a risk factor (P) were modifi ed to an alternative exposure scenario (P´). 9 The generalised version of the PAF relationship allows both exposure and relative risk to vary over time. Relative risk at time (t) depends on time since exposure initiation or cessation, because the eff ects of smoking and indoor air pollution accumulate gradually after exposure begins (eg, smoking initiation) and reverse gradually after exposure stops (eg, smoking cessation). 10, 11 We did separate analyses for lung cancer and COPD and for men and women, because they have diff erent relative risks. For both lung cancer and COPD, we fi rst computed PAFs separately for smoking and solid-fuel use. COPD and lung cancer are caused by multiple risk factors acting simultaneously, and hence a proportion of deaths might be prevented by reducing exposure to either factor. 9, 12, 13 For example, some COPD deaths among smokers who cook with solid fuels may be prevented by smoking prevention or by use of clean fuels. As a result of multicausality, the PAFs for multiple risk factors overlap, and cannot be combined by simple addition. We estimated the PAFs for the combined eff ects of smoking and solid fuel, accounting for multicausality and avoiding double-counting the overlap of multiple risk factors: 9, [12] [13] [14] PAF i =PAF of the i th risk factor n=number of risk factors Three conditions must hold when using the above equation. First, exposures to risks should be uncorrelated. The cross-province correlation coeffi cient between solidfuel use and smoking, from the data sources described in webappendix 1, was 0·04 (95% CI -0·32 to 0·40, p=0·82) for men and -0·11 (-0·45 to 0·26, p=0·56) for women, indicating small and non-signifi cant correlation. We also examined individual-level correlation with the 2006 panel from The China Health and Nutrition Survey (a multistage, random cluster survey, including 9788 adults in nine provinces throughout China with signifi cant variation in socioeconomic and health status). 15 61% of men and 4% of women had ever smoked in homes that did not use solid fuels and 63% of men and 4% of women had ever smoked in homes that did. The odds ratios for smoking, comparing solid-fuel users to non-users, was 1·07 (0·95-1·20) for men and 1·02 (0·76-1·36) for women, showing uncorrelated exposures. The second condition is that the hazardous eff ects of one risk are not mediated through other risks. Smoking and solid-fuel combustion are both sources of respirable pollutants, but the eff ects of pollutants from one source are not mediated through exposure to the other. The third condition is that the proportional eff ects of one risk do not depend on exposure to the other risk factor. The proportional mortality study of smoking in China showed that the relative risks of lung cancer and respiratory-disease mortality among Chinese smokers were not modifi ed by background disease levels, 16",
"cite_spans": [
{
"start": 181,
"end": 182,
"text": "9",
"ref_id": "BIBREF5"
},
{
"start": 564,
"end": 567,
"text": "10,",
"ref_id": "BIBREF6"
},
{
"start": 568,
"end": 570,
"text": "11",
"ref_id": "BIBREF7"
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{
"start": 958,
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"text": "9,",
"ref_id": "BIBREF5"
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{
"start": 961,
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"text": "12,",
"ref_id": "BIBREF8"
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{
"start": 965,
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"text": "13",
"ref_id": "BIBREF9"
},
{
"start": 1393,
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"text": "9,",
"ref_id": "BIBREF5"
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{
"start": 1396,
"end": 1400,
"text": "[12]",
"ref_id": "BIBREF8"
},
{
"start": 1401,
"end": 1405,
"text": "[13]",
"ref_id": "BIBREF9"
},
{
"start": 1406,
"end": 1410,
"text": "[14]",
"ref_id": "BIBREF10"
}
],
"ref_spans": [],
"section": "Analytical models"
},
{
"text": "When susceptible (S) individuals are infected, they enter a state of fast latency (L) from which they may experience primary progression to the infectious (I) state. If not progressed within 5 years of infection, patients enter slow latency, where they may progress to the infectious state via endogenous reactivation at a greatly reduced rate. Individuals in the infectious state can be treated and enter the recovered (R) state from which they remain at risk of relapse to active disease. Individuals in the slowly progressive latent state or the recovered state are at risk of reinfection, although prior infection confers partial immunity. Individuals in any state can die, and new individuals enter the system via the susceptible compartment. ",
"cite_spans": [],
"ref_spans": [],
"section": "Figure 1: Compartmental susceptible-latent-infectious-recovered (SLIR) model of tuberculosis infection"
},
{
"text": "See Online for webappendix 1 which is consistent with no eff ect modifi cation of relative risks between these two risks.",
"cite_spans": [],
"ref_spans": [],
"section": "Figure 1: Compartmental susceptible-latent-infectious-recovered (SLIR) model of tuberculosis infection"
},
{
"text": "We calculated the annual number of lung cancer and COPD deaths avoidable by reducing exposure to smoking and solid fuels, individually as well as combined, by multiplying the corresponding PAF by the projected total disease-specifi c deaths for the year of analysis.",
"cite_spans": [],
"ref_spans": [],
"section": "Figure 1: Compartmental susceptible-latent-infectious-recovered (SLIR) model of tuberculosis infection"
},
{
"text": "The incidence of tuberculosis depends on risk-factor exposure and population prevalence of infectious cases. We used a dynamic tuberculosis transmission model, specifi cally the deterministic compartmental susceptiblelatent-infectious-recovered model (fi gure 1), described in detail elsewhere. 17, 18 The susceptible-latent-infectious-recovered model parameters were based on previous epidemiological studies on the natural history of tuberculosis and risk factors, China-specifi c demographic parameters, and calibration to epidemiology in China (webtable 1). We introduced smoking and indoor air pollution into the model by stratifying the model population into the four possible combinations of exposure to these risk factors, proportional to their actual (time-varying) prevalence in each province. We fi tted a time-varying transmission parameter, defi ned as the rate at which infectious individuals are able to infect people who are susceptible. Available data and previous modelling suggested that the transmission parameter declined almost linearly in England and Wales from about 20 in 1900 to about 1 at the end of the 20th century. 19 We set the value of the transmission parameter to 20 in 1900, and it declined linearly to an empirically-fi tted lower bound; the rate of decline and the lower bound were fi tted to minimise the root mean square of the diff erences between the modelled and observed tuberculosis prevalence by province. The fi tted lower bound, which determines tuberculosis incidence after 2000, was not sensitive to the initial transmission parameter in 1900. Model fi tting also considered that chemotherapy was unavailable before 1960 20 and that the mean duration of disease is 2 years without treatment, 0·8 years under eff ective DOTS (directly observed treatment, short course), and 1·5 years for programmes other than eff ective DOTS. 21 We applied the calibrated model to estimate future tuberculosis incidence under diff erent scenarios of smoking, solid-fuel use, and DOTS coverage.",
"cite_spans": [
{
"start": 295,
"end": 298,
"text": "17,",
"ref_id": "BIBREF12"
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{
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},
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],
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"section": "Figure 1: Compartmental susceptible-latent-infectious-recovered (SLIR) model of tuberculosis infection"
},
{
"text": "To account for heterogeneity across provinces, we did tuberculsosis analyses at the provincial level. We present results for provinces that span a range of characteristics: Jiangsu, a province with moderate historical prevalence of tuberculosis and representative historical trend in prevalence compared to other provinces and Guizhou and Shanghai which have prevalences and trends that diff er from other provinces (webfi gure 1).",
"cite_spans": [],
"ref_spans": [],
"section": "Figure 1: Compartmental susceptible-latent-infectious-recovered (SLIR) model of tuberculosis infection"
},
{
"text": "We detail the methods and sources for estimating past trends in smoking, 22 Smoking prevalence in Chinese men has recently declined; 33 many high-income and some middleincome countries (eg, South Africa, Poland, Thailand) have reduced tobacco smoking from its peak through a combination of taxation, regulation (eg, public smoking or advertising ban), and health education; 34-37 the fi nal smoking prevalence of 30% is selected to be slightly higher than those in high-income countries, such as the UK and the USA, where more eff ective tobacco control policies and programmes have been implemented 38 Aggressive control",
"cite_spans": [
{
"start": 73,
"end": 75,
"text": "22",
"ref_id": "BIBREF17"
},
{
"start": 600,
"end": 602,
"text": "38",
"ref_id": null
}
],
"ref_spans": [],
"section": "Risk-factor exposure and DOTS data sources and scenarios"
},
{
"text": "Male smoking prevalence declines more rapidly between 2003 and 2033, reaching 15% in each province in 2033",
"cite_spans": [],
"ref_spans": [],
"section": "Risk-factor exposure and DOTS data sources and scenarios"
},
{
"text": "Nationally, Singapore, Australia, and Canada have successfully reduced smoking prevalence to below 20% through eff ective tobacco control policies and interventions; 38-40 below 20% prevalence was also achieved through the Massachusetts Tobacco Control Program; 41 a prevalence of 15% is therefore feasible through eff ective tobacco control mechanisms",
"cite_spans": [],
"ref_spans": [],
"section": "Risk-factor exposure and DOTS data sources and scenarios"
},
{
"text": "To zero Male smoking prevalence declines to zero in 2033",
"cite_spans": [],
"ref_spans": [],
"section": "Risk-factor exposure and DOTS data sources and scenarios"
},
{
"text": "This is an ideal scenario, included to provide a theoretical upper-bound on the benefi ts of gradual smoking reduction over the projection period",
"cite_spans": [],
"ref_spans": [],
"section": "Risk-factor exposure and DOTS data sources and scenarios"
},
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"text": "Large rise Female smoking prevalence rises to reach 30% in each province in 2033",
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"text": "The worst-case scenario for female smoking, in which the female smoking epidemic succeeds that of males, as seen in high-income, central European, and Latin American countries, 37, 38 where female smoking prevalence typically peaked at levels lower that of men, 37,38 hence set to 30%",
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"text": "Female smoking prevalence rises to reach 15% in each province in 2033",
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"text": "Similar to large rise in female smoking with a lower peak, as seen for example in Japan; 38 This is an ideal scenario, included to provide a theoretical upper-bound on the benefi ts of gradual smoking reduction over the projection period See webfi gure 2 for prevalence over time. We used China Data Online 31 for data on provincial populations. The future projections of the national population came from the Population Division of the Department of Economic and Social Aff airs of the UN Secretariat 32 and those of the disease-specifi c mortality from the global burden of disease study conducted by the WHO. Global burden of disease forecasts disease-specifi c mortality on the basis of projections of economic and social development, smoking, obesity, and selected other disease determinants. 1 We constructed scenarios that represent the range of policies and programmes that can reduce smoking and solid-fuel use on the basis of experiences and trends in other countries and some parts of China (tables 1 and 2 and webfi gure 2). All scenarios covered a period of 30 years (2003-33). We constructed prevalence of risk factors over time in the scenarios for each province with a linear time trend, and aggregated the provincial prevalences to the national level. More than 99% of the tobacco market share in China is controlled by the Chinese National Tobacco Corporation. Tobacco prices and taxes are low and there are only a few tobacco control measures in place. 38 However, China ratifi ed the Framework Convention on Tobacco Control in October 2005, which came into eff ect in January, 2006. Future smoking prevalence will largely depend on the extent to which economic and regulatory approaches to tobacco control are pursued. Although male and female smoking prevalences probably have common policy determinants, the analyses of lung cancer and chronic disease mortality were done separately for men and women and included all sex-specifi c scenarios. The analysis for tuberculosis was done for men and women combined because relative risks were for both sexes combined and because there are indirect eff ects of smoking on tuberculosis between sexes. National adult smoking prevalence was 49·6% for men and 3·0% for women in 2003 according to the National Health Service Survey. Another National Tobacco Prevalence Survey in 2002 reported current smoking prevalence of 57·4% for men and 2·6% for women. The two surveys had slightly diff erent defi nitions of current smoking. 22, 33 Tobacco consumption per person in China peaked around 1990 and has declined slowly since then. 38 Data from three National Health Service Surveys (1993, 1998, 2003) show that smoking prevalence declined from 60·3% to 49·6% among men (standardised to the 2003 population); smoking in women declined from 4·7% to 3·0% in this period.",
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"text": "Solid fuels comprise biomass (wood, crop residues, animal dung, and charcoal) and coal and are used for cooking and heating. Only coal smoke raises the risk of lung cancer in epidemiological studies although wood smoke contains small amounts of carcinogens. 47 Non-solid fuels, which have substantially lower emissions of health-damaging pollutants, include liquid and gaseous fuels and electricity. 47 Solid-fuel scenarios only encompass fuel changes and did not take into account alternative stoves. China has implemented an ambitious programme to disseminate improved cooking stoves, 54, 55 primarily to improve effi ciency and reduce fuel use. The",
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"text": "Reason for scenario use",
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"section": "Defi nition"
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"text": "Unchanged Proportion of households using solid fuels remains at its 2003 level in every province",
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"text": "Evidence indicates that few households revert back to solid fuels once they have transitioned to cleaner fuels, with the possible exception of the poorest countries (eg, some in sub-Saharan Africa) during international or national energy or economic crises; 42 therefore, stabilisation at current prevalence is the likely upper bound for household solid fuel use",
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"text": "Half current Percent of households using solid fuels declines to one half of its 2003 level in each province in 2033",
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"text": "In China, rapid economic growth has contributed to near-universal access to electricity for lighting and for services such as television, but solid-fuel use for cooking and heating has persisted, with 72% of Chinese households continuing to use solid fuels according the 2000 National Census; [43] [44] [45] [46] this scenario is based on the experience of middle-income countries (eg, those in Latin America) that have reduced household solid-fuel use through active policy interventions [47] [48] [49] Urban-rural Percent of households using solid fuels declines to zero in urban populations and to one half of its 2003 level in rural populations in each province in 2033",
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"text": "This scenario modifi es the previous scenario of \"decline to half the current level\" to acknowledge that there are better-developed supply chains in urban populations, even at the same income level; 8, 42, 50 in China, increased attention to urban air quality may also motivate faster and more extensive transitions in urban areas as has been done in other cities [51] [52] [53] To zero Percent of households using solid fuels declines to zero in 2033",
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"text": "This is an ideal scenario which provides an upper-bound on the benefi ts of clean fuels over the projection period",
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"text": "All biomass converted to coal",
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"ref_spans": [],
"section": "Share of solid fuels from coal"
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"text": "The coal share of solid fuel increases to 100% in each province by 2033",
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"section": "Share of solid fuels from coal"
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"text": "Although until the 1980s and 1990s biomass was the dominant source of household energy in China, deforestation and policies to reduce and reverse it have compelled many rural residents to switch to from biomass to coal 43, 54 Unchanged coal share of solid fuels",
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"text": "The coal share of solid fuel remains at its 2003 level Given the past trends in biomass to coal conversion, and its policy drivers, this is the lowest bound for coal share of solid fuels See webfi gure 2 for fuel-use over time. 54 If alternative stove designs reduce exposure signifi cantly, they can be treated as equivalent to fuel change; partial exposure reduction can be modelled with eff ect sizes between those for solid fuels and clean fuels.",
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"text": "The same solid-fuel scenarios were used for men and women but the relative risk is higher for women (table 3) 32 The national change in relative proportion of urban and rural population over time was applied to all provinces. The proportion of diff erent categories of solid-fuel use in future scenarios were calculated such that transitions from coal and biomass to clean fuels in any year were proportional to their prevalence in the year of transition.",
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"text": "China made signifi cant progress in DOTS expansion between 1990 and 2000 in 13 provinces, municipalities, and autonomous regions. After the outbreak of severe acute respiratory syndrome, China further expanded DOTS coverage so that nationally an estimated 80% of smear-positive cases of tuberculosis were detected and treated in 2005. 56 We used time-varying treatment coverage in each province and municipality based on province-specifi c implementation before 2002 and a range of possible scenarios from 2003 (webtable 2).",
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"text": "We used relative risks for the eff ects of smoking on lung cancer and COPD from the retrospective proportional mortality study of smoking in China 16 (table 3) , and from meta-analyses of Chinese cohort studies in a sensitivity analysis (webappendix 2). The relations between smoking or indoor air pollution from solid-fuel use and chronic diseases have a dose-response relationship; therefore risks might diff er for men and women.",
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"text": "Because the deaths in the proportional mortality study occurred in 1986-88, around the peak of the smoking epidemic in China, 16, 38 relative risks for COPD and lung cancer were substantially lower than in populations in Europe and the USA, which have smoked longer. Low relative risks have also been observed in other Asian populations, which likewise began smoking late. 57 Studies in European and American cohorts at diff erent stages of the tobacco epidemic have shown that relative risks for chronic diseases rise for decades after the peak of the smoking epidemic. 10, 58 To account for the accumulation of risk, we allowed COPD and lung cancer relative risks from the proportional mortality study to increase to those from the American Cancer Society Cancer Prevention Study, phase II (CPS-II), which was done primarily in lifelong smokers. 58 In sensitivity analyses, we allowed relative risks to remain at their 1986-88 levels over the complete analysis period, representing the possibility that smoking may be associated with smaller relative risks in Asian populations than among others.",
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"text": "We used relative risks for the eff ects of indoor air pollution from solid-fuel use on COPD (all solid fuels) and lung cancer (coal only) from a recent systematic review and meta-analysis of cohort, case-control, and cross-sectional studies. 47 Because the Chinese population and those in the epidemiological studies have used solid fuels for a long time, relative risks are expected to be at their peak. The relative risks for the eff ects of smoking and solid-fuel use on tuberculosis were from a recent meta-analysis. 5 The relative risks of smoking and indoor air pollution for COPD and lung cancer decline gradually after exposure stops. We used the change after exposure cessation estimated with data from CPS-II (webfi gure 3). The CPS-II fi ndings are consistent with studies on how indoor air pollution interventions reduce the COPD and lung cancer relative risks over time 59, 60 but provide data in fi ner time intervals. We used a symmetric pattern for the increase in relative risk after exposure begins.",
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"text": "Smoking might increase the risk of latent tuberculosis infection or the risk of progression to active disease from latent infection. For smoking and latent infection, we used the pooled estimate from a recent meta-analysis, 5 which had relative risks for disease similar to other published meta-analyses. 6, 7 The relative risk for progression to active tuberculosis was obtained by dividing that for smoking and active tuberculosis from the only cohort study (2·87) 61 relative risk in the only study of smoking and active disease among people who were latently infected. 62 We separated the relative risk for the eff ects of solid-fuel use on active tuberculosis into the eff ects on latent infection and progression to active diseases using the same proportions as for smoking.",
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"text": "The sponsor of the study had no role in study design, data collection, data analysis, data interpretation or writing of the report. The corresponding author had full access to all data in the study and had fi nal responsibility for the decision to submit for publication.",
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"text": "If tobacco smoking and solid-fuel use remain at their current levels, between 2003 and 2033 an estimated 65 million people will die of COPD and 18 million of lung cancer in China, accounting for 19% and 5%, respectively, of all deaths over this period. 1 82% of the COPD deaths (53 million) and 75% of lung cancer deaths (14 million) will be attributable to the combined eff ects of smoking and solid-fuel use (fi gure 2). 52% of COPD deaths and 82% of lung cancer deaths attributable to these risks will be among men. Of the 67 million COPD and lung cancer deaths attributable to smoking and solid-fuel use, over 10 million (8·1 million from COPD and 2·0 million from lung cancer) are unavoidable, even if all smokers had quit and all households had begun to use clean fuels in 2003, because the eff ect of the exposures on chronic diseases persist even after exposure ends. Men who stop smoking in 2003 are expected to lower their absolute risks of COPD by 56% and lung cancer by 60% after 5 years relative to those who continue smoking (the reductions for women are 63% for COPD and 75% for lung cancer; webfi gure 3). Risks will be lowered by 83-84% (COPD) and 83-86% (lung cancer) after 10 years and 91-92% (COPD) and 88-91% (lung cancer) after 20 years (webfi gure 3). At the population level, with moderate tobacco control, the sum of the annual avoided COPD and lung cancer deaths among men would be an estimated 4·6 and 1·9 million, respectively, 15% of all projected deaths of men from these diseases (webfi gure 4). If tobacco control is aggressive, with smoking in men declining to 15% by 2033, 8·0 million COPD deaths and 3·3 million lung cancer deaths would be averted.",
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"ref_spans": [],
"section": "Results"
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"text": "If female smoking gradually declines to zero by 2033, the sum of the annual avoided COPD and lung cancer deaths would be 4·9 and 0·76 million, averting 14% and 13% all projected female deaths from these diseases (webfi gure 4). Conversely, if female smoking rises to 30% by 2033, an additional 2·2 million COPD deaths and 0·60 million lung cancer deaths are expected among Chinese women. This asymmetry of benefi ts and harms occurs because the relative risks seem to rise slowly among new smokers but fall steeply in former smokers (webfi gure 3).",
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"ref_spans": [],
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"text": "Halving solid-fuel use by 2033 would lower the sum of the annual number of COPD and lung cancer deaths, respectively, by 2·2 million and 0·30 million in men (7% and 2% of deaths from these causes) and by 4·3 million and 0·27 million in women (12% and 5% of deaths from these causes; webfi gure 5). Proportionally, more deaths are prevented among women because they are closer to the pollution source during cooking, have higher exposure to pollutants, and hence higher relative risks. The benefi ts would be twice as large with a complete transition to clean fuels.",
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"text": "After accounting for the overlap between the eff ects of the two risk factors, if smoking and solid-fuel use are If there is sustained 80% coverage of eff ective DOTS (webtable 2), the annual incidence of infectious tuberculosis in the three provinces presented here is estimated to decline after 2003, even if smoking and solid-fuel use remain at their current levels (fi gure 4). Nonetheless, reducing smoking and solid fuels would further reduce incidence of tuberculosis from projected levels. The estimated reductions in 2033, under diff erent scenarios of smoking and solid-fuel use, range from 10% to 23% of the projected levels in Jiangsu, 35% to 52% in Guizhou (where prevalence has increased), and 5% to 14% in Shanghai (where prevalence has been lowest; fi gure 4).",
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"text": "Incidence of tuberculosis is projected to decline even when DOTS implementation is less eff ective. The decline in incidence in these three provinces will be 4-28% less under moderate DOTS than under optimum DOTS, and 11-79% smaller under minimum DOTS. This slower decline in tuberculosis incidence would, in turn, lead to smoking and solid-fuel interventions having larger relative and absolute benefi cial eff ects on trends in tuberculosis (fi gure 4). For example, in Jiangsu province, the relative reduction in projected incidence in 2033, under diff erent scenarios of smoking and ",
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"text": "Reductions in smoking and solid-fuel use can signifi cantly reduce the burden of COPD and lung cancer. Moderate, aggressive, and complete reduction of these exposures over the next three decades, through mechanisms such as tobacco taxation, advertising ban, and fuel pricing, can lead to 7-38% reduction in deaths from these two diseases, which have few other eff ective treatments.",
"cite_spans": [],
"ref_spans": [],
"section": "Discussion"
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"text": "We observed a diff erence in how risk-factor interventions aff ect population-level trends in tuberculosis compared with those of COPD and lung cancer: in the absence of new technologies for early detection and treatment, the burden of COPD and lung cancer will remain high as long as smoking and indoor air pollution persist because these two risk factors are the most important causes of chronic respiratory disease incidence and mortality in China. But tuberculosis incidence can decline signifi cantly because treatment reduces the risk of infection through reducing the duration of infectiousness. Nonetheless, smoking and solid-fuel interventions should be components of tuberculosis control for at least three reasons. First, irrespective of coverage and eff ectiveness of DOTS, risk-factor interventions can further reduce incidence of tuberculosis. The complementary eff ects of risk-factor interventions occur through reducing the risk of latent infection and progression from latent infection to infectious disease. Second, reducing smoking in patients with tuberculosis might further strengthen DOTS eff ectiveness because smoking has been associated with delayed response to treatment. 63 Third, reducing smoking may itself lower the risk of drug resistance as recent studies have suggested a link between smoking and drug-resistant tuberculosis. 64, 65 Our quantitative analysis of the eff ects of the two leading environmental and lifestyle sources of respirable pollutants on a common set of infectious and chronic diseases used models that incorporated the aetiological risk factors in disease incidence and mortality over time. Specifi cally, our models and data sources accounted for the fact that eff ects on lung cancer and COPD accumulate or reverse gradually after exposure begins or stops and for dependency of tuberculosis incidence on prevalent infectious cases. We used several large sources of data to reconstruct consistent and comparable trends of smoking, solid-fuel use, and tuberculosis in China's provinces. Scenarios were constructed on the basis of policy experiences in China and other countries, and can provide programme targets and benchmarks. Current and projected mortality from COPD and lung cancer from the global burden of disease analysis used Chinese mortality data sources and accounted for demographic and socioeconomic development. 1 The relative risks and how they change over time were based on meta-analyses and large high-quality epidemiological studies in China and elsewhere.",
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"text": "Population-level analyses of mortality eff ects of risk factors, including ours, may also be aff ected by some limitations and uncertainties. We quantifi ed selected major sources of uncertainty in sensitivity analyses (webappendices 2 and 3, webfi gures 6 and 7, and webtables 3-5). These analyses show that the largest source of uncertainty for COPD and lung cancer is whether the relative risks of smoking related diseases in China will reach those observed in western populations. One recent study in China is consistent with increasing relative risks, 66 but the possibility of ethnic diff erences cannot be ruled out. 67 Benefi ts of tobacco control in diff erent scenarios would be 23-81% smaller for men and 84-94% smaller for women if the relative risks for eff ects of smoking on COPD and lung cancer do not rise signifi cantly after the peak of the smoking epidemic (webfi gure 6). The eff ects of all other sensitivity analyses on the number of averted deaths from COPD and lung cancer were less than 11% for the combined eff ects of smoking and solid-fuel use, and less than 18% for the eff ects of individual risk factors.",
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"text": "The predictions for tuberculsosis are subject to uncertainties of model parameters, including how smoking and indoor air pollution aff ect the risk of diff erent stages of tuberculosis natural history (latent infection versus progression) and the values of the transmission and progression parameters (webappendix 3, webfi gure 8, and webtable 5). These analyses show that the largest source of uncertainty for the tuberculosis model is the future trend of transmission parameter, which depends on how sociodemographic change aff ects the patterns of contact and other determinants of transmission in China. If factors such as higher population density and increased travel increase the number of contacts that lead to tuberculosis transmission, the transmission parameter might not continue its expected decline. In this case, reducing smoking and indoor air pollution will have an even greater eff ect on tuberculosis control than estimated. For example, if the transmission parameter in Jiangsu doubles over the next 30 years, the benefi ts of the diff erent scenarios of smoking, solid-fuel use would be 58-77% greater than the original analysis in fi gure 4. Multiparameter uncertainty analysis showed the interquartile range of the estimated eff ects was within 14-33% of its central value in all provinces and in all scenarios of DOTS, smoking, and solid-fuel use. Finally, the causal link between smoking and tuberculosis is based on a larger number of epidemiological studies than that of indoor air pollution from solid-fuel use. If the causal eff ect on tuberculosis were only from smoking, the benefi ts of reducing exposure would be smaller than those in fi gure 4, by 19-37% for diff erent scenarios in Jiangsu, by 23-32% in Guizhou, and by 9-13% in Shanghai. In addition to the above sources of uncertainty, fundamentally new technologies for early detection and treatment of chronic diseases could signifi cantly aff ect future burden. Discovery and large-scale use of such technologies over the duration of our analysis are less likely for COPD, but cannot be ruled out for lung cancer and tuberculosis. Finally, relative risks from meta-analyses may not be generalisable to population-level eff ects; nevertheless, such estimation is necessary and indispensable to inform policy making.",
"cite_spans": [],
"ref_spans": [],
"section": "Discussion"
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"text": "In addition to smoking and solid-fuel use, respiratory diseases are aff ected by other sources of inhaled pollutants, including passive smoking, air pollution from transport and industrial sources, and occupational exposures. In China, in 2003 passive smoking was responsible for an estimated 17 000 and 7000 deaths from COPD and lung cancer, respectively, among men (compared with 412 000 and 170 000 from direct smoking) and 126 000 and 25 000 deaths among women (compared with 113 000 and 16 000) because substantially more women are non-smokers and exposed to passive smoking 33 (webappendix 2). The quantitative evidence on the eff ects of passive smoking on tuberculosis is more limited, although a causal eff ect is likely. 5 Ambient urban air pollution, which in China might be partly due to household solid-fuel use, was responsible for an estimated 32 000 lung cancer deaths and 317 000 cardiopulmonary deaths in the Western Pacifi c region in 2000 (no independent eff ects on COPD were estimated for ambient urban air pollution) and selected occupational exposures for an estimated 34 000 lung cancer deaths and 161 000 COPD deaths in the same region. 4 The eff ect of ambient air pollution on tuberculosis has not been investigated in epidemiological studies.",
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"text": "Infectious and chronic respiratory diseases, smoking, and indoor air pollution are either already concentrated or increasingly prevalent in developing countries. In addition to their disease burden, these diseases have large and inequitable household and societal economic burden associated with health-care costs, reduced labour-market participation, and decreased accumulation of human capital, described in detail elsewhere for China and for other developing countries. [68] [69] [70] [71] [72] Our results show that reducing common risk factors could have a substantial eff ect on future burden of COPD and lung cancer, and be an important contributor to tuberculosis control. Our fi ndings have several potential policy and programme implications at the national, community, household, or individual levels. At the national level, our results on the projected burden of disease from COPD and lung cancer alone reinforce the need for regulatory and economic policies that reduce smoking and promote clean household energy sources in China. Tuberculosis control however cannot rely on risk-factor reduction as its main intervention, and the core of national or regional tuberculosis control programmes should remain interventions that can reduce and eventually interrupt transmission under generalisable circumstances, currently DOTS. Nonetheless, at the community level, some interventions could increase the coverage or community eff ectiveness of others. For example, case detection and treatment completion under DOTS in China have been constrained by limitations of physical and human infrastructure, fi nancial factors, and compliance, especially in rural areas and marginalised social groups. [73] [74] [75] [76] Low-income or marginalised communities could be enrolled in programmes that provide cleaner fuels or stoves and nutritional supplements, conditional on periodic tuberculosis tests and DOTS treatment completion. At the individual level, tobacco cessation can be added to tuberculosis treatment, possibly with fi nancial incentives. 77, 78 If multiple interventions are implemented, the management structure of DOTS, including its standardised approach to registration, recording, and reporting of enrolled individuals (or households) and their status in receiving intervention, can strengthen planning and implementation of interventions for indoor air pollution and smoking. 79 Tobacco taxes might also be used to subsidise DOTS, clean energy technology, and nutrition for low-income households that take part in integrated programmes. An important next step would be a policy dialogue between the diff erent economic, energy, and health-sector agencies in China as well as community-based intervention studies that assess the eff ectiveness of combining risk factor interventions with tuberculosis case fi nding and treatment under actual conditions of implementation.",
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"text": "HHL, MM, and ME designed the study and the analyses. HHL and ME collected data and wrote the report, with input from other authors. HHL conducted data analysis. ME contributed to analysis for chronic diseases. MM, TC, and CC contributed to analysis for TB. All authors reviewed and approved the fi nal report.",
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"section": "Contributors"
},
{
"text": "We declare that we have no confl ict of interest.",
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"section": "Confl ict of interest"
}
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"FIGREF1": {
"text": ", 47 possibly because they spend more time near the stove. The latest fuel data were from the national census for the year 2000. To be consistent with the smoking and tuberculosis data, we used the 2000 data for 2003, the fi rst year of analysis. The proportion of China's population in urban areas is increasing. To incorporate this eff ect in the solid-fuel scenarios, we used the current and projected urban and rural population share from the Population Division of the Department of Economic and Social Aff airs of the United Nations Secretariat.",
"latex": null,
"type": "figure"
},
"FIGREF2": {
"text": "by the pooled estimate for smoking and latent infection (1·90). The estimated relative risk of 1·5(table 3)is within the 95% CI of the See Online for webtable 2 The two numbers show relative risks for the beginning and end of analysis period in the main analysis to account for the delayed smoking epidemic in China. We used the same relative risks for the current and future eff ects of smoking on tuberculosis, because the studies used in the meta-analysis were from populations with various durations of past exposure and because risk accumulation may be diff erent from chronic diseases like COPD and lung cancer.",
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"text": "Sum of annual deaths 2003-33 for both sexes if exposure for both sexes to smoking and solid fuel use are reduced to zero by 2033 See Online for webfi gure Annual mortality in men from COPD (A) and lung cancer (B) and in women from COPD (C) and lung cancer (D) under combined scenarios of smoking and solid fuel use Not avoidable deaths are those if risk-factor exposures were reduced to zero in 2003. See webfi gures 4 and 5 for separate results for smoking and solid fuel use. See Online for webfi gure 4 gradually eliminated between 2003 and 2033, an estimated 26 million COPD deaths (40% of all projected COPD deaths) and 6·3 million lung cancer deaths (34% of all projected lung cancer deaths) would be avoided (fi gures 2 and 3). The intermediate scenarios have the potential to reduce mortality from these diseases by an estimated 17-34% among men and 18-29% among women. The prevalence of active tuberculosis declined between 1979 and 2000 in most provinces in China (webfi gure 1).",
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"FIGREF4": {
"text": "Annual incidence of infectious tuberculosis under combined eff ects of smoking and indoor air pollution scenarios by municipality and DOTS eff ectivenessDecreases in incidence with optimum, moderate, or minimum DOTS in Jiangsu (A, B, C, respectively) and Guizhou (D, E, F) and for Shanghai (G), which already has eff ective DOTS so non-optimum scenarios not shown.solid-fuel use, would be 10-23% under optimum DOTS, 12-27% under moderate DOTS, and 15-33% under minimum DOTS.",
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"text": "See Online for webfi gure 1",
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"text": "a lower peak than in other populations may result from sociocultural factors Unchanged Female smoking prevalence remains at its 2003 low level in each provinceSociocultural factors might prevent female smoking prevalence to rise further with economic development, as evidenced by relative long-term stability of female smoking",
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"text": "Smoking scenarios",
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"text": "Relative risks of smoking and solid-fuel use on COPD, lung cancer, and tuberculosis",
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"back_matter": [
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"text": "This research was funded by the International Union Against Tuberculosis and Lung Disease, through a grant from the World Bank. We thank Cheng-Yuan Chiang, Donald Enarson, Enis Baris, and Ziad Obermeyer for valuable discussion on methods and models, Colin Mathers for mortality projections, Zheng Zhou for help with data on smoking and fuel use, Jonathan Sinton for discussions on fuels use trends in China, and the Chinese Ministry of Health for tuberculosis prevalence data. We thank the China Health and Nutrition Survey, Jill Boreham, Rachel Huxley, and Zhengming Chen for valuable information and data on risk factor exposure and eff ects.",
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"title": "Seroprevalence of Rodent Pathogens in Wild Rats from the Island of St. Kitts, West Indies",
"authors": [
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"first": "Kenneth",
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"last": "Boey",
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"email": "boey_kenneth@hotmail.comk.b."
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"first": "Kanae",
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"last": "Shiokawa",
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"email": "kshiokawa@yahoo.comk.s."
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"first": "Harutyun",
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"last": "Avsaroglu",
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"email": "havsaroglu@rossvet.edu.knh.a.*correspondence:sree63rajeev@gmail.com"
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"text": "The role of rodents in the transmission of many diseases is widely known. Wild rats abundant in urban environments may transmit diseases to humans and other animals, including laboratory rodents used for biomedical research in research facilities, possibly compromising research data. In order to gather information about the various diseases present around such facilities, it is important to conduct routine surveillance of wild rodents in the area. In this pilot study, we surveyed 22 captured wild rats (Rattus norvegicus and Rattus rattus) from the Caribbean island of St. Kitts for 19 microorganisms. Information gained from such surveillance data would be beneficial in assessing regional public health risks and when implementing routine laboratory rodent health monitoring protocols.",
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"text": "Abstract: A pilot seroprevalence study was conducted to document exposure to selected pathogens in wild rats inhabiting the Caribbean island of St. Kitts. Serum samples collected from 22 captured wild rats (Rattus norvegicus and Rattus rattus) were tested for the presence of antibodies to various rodent pathogens using a rat MFI2 serology panel. The samples were positive for cilia-associated respiratory bacillus (13/22; 59.1%), Clostridium piliforme (4/22; 18.2%), Mycoplasma pulmonis (4/22; 18.2%), Pneumocystis carinii (1/22; 4.5%), mouse adenovirus type 2 (16/22; 72.7%), Kilham rat virus (15/22; 68.2%), reovirus type 3 (9/22; 40.9%), rat parvovirus (4/22; 18.2%), rat minute virus (4/22; 18.2%), rat theilovirus (2/22; 9.1%), and infectious diarrhea of infant rats strain of group B rotavirus (rat rotavirus) (1/22; 4.5%). This study provides the first evidence of exposure to various rodent pathogens in wild rats on the island of St. Kitts. Periodic pathogen surveillance in the wild rat population would be beneficial in assessing potential regional zoonotic risks as well as in enhancing the current knowledge when implementing routine animal health monitoring protocols in facilities with laboratory rodent colonies.",
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"text": "Wild and peridomestic rats, especially the Norway rat (Rattus norvegicus) and black rat (Rattus rattus), are known reservoirs of a number of rodent and zoonotic pathogens [1] . They are ubiquitous in urban and rural environments and are major pests of public health significance, as they carry and transmit pathogens that can cause significant mortality in humans and animals [2] . Wild rats may pose an animal biosecurity risk to laboratory rodent colonies due to inadvertent transmission, possibly causing significant complications in biomedical research [3] , in addition to zoonotic risks to laboratory animal caretakers and other personnel.",
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"text": "To gather pertinent information and document evidence of the exposure to common rodent pathogens in wild rats inhabiting the island of St. Kitts, West Indies, we conducted a pilot seroprevalence study and screened wild rats from the island for selected rodent pathogens.",
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"text": "This study was conducted at Ross University School of Veterinary Medicine (RUSVM), Basseterre, St. Kitts, West Indies, adhering to a protocol approved by the Institutional Animal Care and Use Committee (protocol no. 17-01-04).",
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"text": "Wild rats were captured with live traps (Tomahawk Trap Co, Tomahawk, WI, USA) around three main areas on the island of St. Kitts (Figure 1 ), from March to April 2017. All trapping locations were in urban areas where rats were expected to be passing. Traps were set overnight and checked the following morning. The captured rats were then immediately transported to the RUSVM necropsy facility. ",
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"start": 129,
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"text": "(Figure 1",
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"text": "Captured rats were euthanized using carbon dioxide gas (CO 2 ) and cervical dislocation. This was performed by placing traps containing the rats in a leak-proof plastic bag and filling it with CO 2 . Once the rats were visibly unconscious, they were taken out of the plastic bag and cervical dislocation was performed as secondary euthanasia. Subsequently, blood was collected by open cardiac puncture. We recorded the weight, sex, and body length of each rat. Serum was obtained after centrifugation of whole blood, and stored at −80 • C until used for serological analysis. The rat species was determined by amplification and sequencing of the mitochondrial cytochrome b gene [5] . Sequences were aligned by Molecular Evolutionary Genetic Analysis version 7.0 (MEGA7) [6] and a search of homologous sequences was performed using Basic Local Alignment Search Tool (BLAST) [7] .",
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"text": "Serum samples were submitted to a commercial laboratory (IDEXX BioAnalytics, Columbia, MO, USA) to detect antibodies against the following agents using a multiplex fluorescent immunoassay ",
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"text": "A total of 29 rats were collected from three areas around the island of St. Kitts, of which 22 were tested for antibodies against various rodent pathogens. For the other seven rats, a sufficient amount of serum was not able to be collected for this study. Of those 22 rats for which an adequate amount of serum was available, 12 (54.5%) were males and 10 (45.5%) were females. The rat species were identified as R. norvegicus (13/22; 59.1%) and R. rattus (9/22; 40.9%).",
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"text": "Exposure to 11 of 19 (57.9%) pathogens tested in the panel was detected, and 21 of the 22 (95.5%) rats sampled were positive for one or more pathogens tested (Table 1, Figure 2 Figure 2 ). No serological evidence of E. cuniculi, HTNV, LCMV, THV, MAV1, PVM, RCV/SDAV, and SeV was detected in any serum sample. Antibodies to significant zoonotic pathogens (HTNV and LCMV) were not detected in any of the samples. According to the serological results, one rat was negative for antibodies to all agents tested, and three rats were positive for antibodies to a single pathogen (two MAV2 and one RTV). Four rats were positive for antibodies to two tested pathogens, while 14 rats had antibodies against three or more of the pathogens tested. The highest number of pathogens detected was in a single rat with antibodies to seven pathogens. R. norvegicus had significantly higher prevalence of KRV (12/22; p ≤ 0.0066) and CARB (11/22; p ≤ 0.0073) compared to R. rattus (3/22 and 2/22, respectively). Fisher's exact test was the statistical method used due to the small sample size. There was no association identified between the presence of any pathogen and sex of the rat. ",
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"text": "This pilot seroprevalence study provides first evidence of the exposure to rodent pathogens in wild rats in St. Kitts, West Indies. Sampling the wild rodent population in St. Kitts for common pathogens known to affect laboratory rodent colonies would be substantially beneficial in enhancing the current knowledge when implementing routine animal health monitoring protocols with respect to the laboratory rodent colony at RUSVM, in addition to assessing for zoonotic risks to laboratory animal care personnel. ",
"cite_spans": [],
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"section": "Discussion"
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{
"text": "This pilot seroprevalence study provides first evidence of the exposure to rodent pathogens in wild rats in St. Kitts, West Indies. Sampling the wild rodent population in St. Kitts for common pathogens known to affect laboratory rodent colonies would be substantially beneficial in enhancing the current knowledge when implementing routine animal health monitoring protocols with respect to the laboratory rodent colony at RUSVM, in addition to assessing for zoonotic risks to laboratory animal care personnel.",
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"text": "In this study, antibodies against CARB, MAV2, and KRV were detected in over half of the rat serum samples tested. KRV, like H-1, RMV, and RPV, is a parvovirus that is frequently found in laboratory and wild rats that can persist in infected rats and the environment for long periods of time, and rats are a natural host for the virus. Unlike H-1, which has low significance in rats, KRV could tremendously interfere with biomedical research involving several body systems, especially if infection occurred during fetal development [3] . Parvoviruses H-1, RMV, and RPV are asymptomatic in naturally infected rats, compared to KRV, which, although rarely, causes clinical signs such as jaundice, ataxia, and scrotal cyanosis [3, 8] . Genetic and/or behavioral differences could be attributed to the increased seroprevalence of KRV in R. norvegicus.",
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"text": "The highest seroprevalence was to MAV2 (strain K87), while none of the samples were positive for MAV1 (strain FL). Mouse adenoviruses are rare and asymptomatic in mice and have minimal interference in biomedical research [3, 9] . The high seroprevalence observed in this study could be attributed to known seroconversion of a different virus to MAV2 in some rat colonies, and the cross-reactivity of MAV1 antiserum with MAV2 [9].",
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"text": "Seroprevalence of CARB in this study was much higher than that of M. pulmonis, which contradicts previous findings of significant correlation and co-infection between the two pathogens [3, 10, 11] . In addition, we found a positive association between exposure to CARB and the species of rat (R. norvegicus), while it was not the case for M. pulmonis. Both pathogens are transmitted by aerosol and cause chronic infections in rodents, with dual infection involving both agents causing more severe pulmonary lesions [3] . In a previous study, the authors found that rats in the study had differences in susceptibility to M. pulmonis but not to CARB, despite similarities between the two infections [12] . This might be a reason for the large difference in seroprevalences of the two pathogens in our study.",
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"text": "REO3 also had a relatively high seroprevalence, though infected rats are usually asymptomatic and natural infection has not been proven to be linked specifically to interference with biomedical research [13] . Of the three serotypes of reoviruses (1, 2, and 3), type 3 is known to be the most pathogenic to laboratory rodents [3] .",
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"text": "Antibodies to HTNV and LCMV were not detected in any of the tested rat serum samples. Both viruses are known to be significant zoonotic pathogens that would be a public health risk [8, 14] . Epidemiologically, the majority of HTNV infection is observed in Asia and in its reservoir host, the field mouse (Apodemus agrarius). Seoul virus, another hantavirus whose infection occurs worldwide, would be of more concern from a public health perspective, as R. rattus and R. norvegicus are the main reservoirs [15] . Further evaluation is needed to determine if the antigen used to detect HTNV antibodies in this panel cross-reacts with antibodies to Seoul virus. In addition, it would be essential to screen antibodies against other hantaviruses depending on the local epidemiology.",
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"text": "Natural exposure and infections without any overt disease have been detected in laboratory rodent colonies, and the majority of these infections are caused by opportunists or commensals [3] . Even in the absence of pathogenic effects or clinical disease, colonization with these pathogens may alter biomedical research data [3, 8] . Using laboratory animals free from such pathogens contributes to the reliability and reproducibility of results in research studies [8] . In addition to the availability of specific pathogen-free rodents and individually ventilated caging, routine pathogen surveillance and health monitoring protocols in modern research facilities have resulted in lower pathogen prevalence in laboratory rodent colonies [16] .",
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"text": "In this pilot seroprevalence study, we demonstrated evidence of exposure to rodent pathogens in wild rats in St. Kitts. Wild rats harbor a variety of rodent and zoonotic pathogens [1] that could be a source of contamination in laboratory rodent colonies, which may compromise biomedical research data, as well as jeopardize human and animal health [3, 8] . Periodic pathogen surveillance in the wild rat population would be beneficial in assessing potential regional zoonotic risks as well as in enhancing the current knowledge when implementing routine animal health monitoring protocols in research and breeding facilities with laboratory rodent colonies. Funding: This study received no external funding.",
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"FIGREF0": {
"text": "Map of St. Kitts, West Indies [4], showing the parishes and areas of rat capture sites (blue circles). A, around the campus of Ross University School of Veterinary Medicine in West Farm, and residential dwellings in Mattingley; B, near commercial establishments in downtown Basseterre and Port Zante; C, around the campus of the St. Kitts Biomedical Research Foundation (nonhuman primate facility) in Lower Bourryeau Estate.",
"latex": null,
"type": "figure"
},
"FIGREF1": {
"text": "Map of St. Kitts, West Indies [4], showing the parishes and areas of rat capture sites (blue circles). A, around the campus of Ross University School of Veterinary Medicine in West Farm, and residential dwellings in Mattingley; B, near commercial establishments in downtown Basseterre and Port Zante; C, around the campus of the St. Kitts Biomedical Research Foundation (nonhuman primate facility) in Lower Bourryeau Estate.",
"latex": null,
"type": "figure"
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"FIGREF2": {
"text": "MFI2) panel (Rat Global Serology): cilia-associated respiratory bacillus (CARB), Clostridium piliforme, Mycoplasma pulmonis, Encephalitozoon cuniculi, Pneumocystis carinii, Toolan's H-1 virus (H-1), Hantaan virus (HTNV), infectious diarrhea of infant rats strain of group B rotavirus (IDIR strain of GBR; rat rotavirus), Kilham rat virus (KRV), lymphocytic choriomeningitis virus (LCMV), mouse adenovirus type 1 (MAV1), mouse adenovirus type 2 (MAV2), pneumonia virus of mice (PVM), rat coronavirus/sialodacryoadenitis virus (RCV/SDAV), reovirus type 3 (REO3), rat minute virus (RMV), rat parvovirus (RPV), rat theilovirus (RTV), and Sendai virus (SeV).",
"latex": null,
"type": "figure"
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"FIGREF3": {
"text": "Seroprevalence of selected rodent pathogens in wild rats from St. Kitts, West Indies. CARB, cilia-associated respiratory bacillus; H-1, Toolan's H-1 virus; HTNV, Hantaan virus; IDIR strain of GBR, infectious diarrhea of infant rats strain of group B rotavirus (rat rotavirus); KRV, Kilham rat virus; LCMV, lymphocytic choriomeningitis virus; MAV1, mouse adenovirus type 1 (strain FL); MAV2, mouse adenovirus type 2 (strain K87); PVM, pneumonia virus of mice; RCV/SDAV, rat coronavirus/sialodacryoadenitis virus; REO3, reovirus type 3; RMV, rat minute virus; RPV, rat parvovirus; RTV, rat theilovirus; SeV, Sendai virus.",
"latex": null,
"type": "figure"
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"FIGREF4": {
"text": "Contributions: Conceptualization: S.R.; Methodology: K.S. and S.R.; Validation: H.A. and S.R.; Formal Analysis: K.B. and K.S.; Investigation: K.S.; Resources: K.S.; Data Curation: K.B. and K.S.; Writing-Original Draft Preparation: K.B.; Writing-Review and Editing: K.B., K.S., H.A., and S.R.; Visualization: K.B.; Supervision: H.A. and S.R.; Project Administration: K.B. and K.S.; Funding Acquisition: S.R.",
"latex": null,
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"TABREF0": {
"text": "). Of the 22 tested serum samples, 72.7% (16/22; 95% confidence interval (CI): 54.1-91.3) were positive for MAV2, 68.2% (15/22; 95% CI: 48.7-87.7) for KRV, 59.1% (13/22; 95% CI: 38.6-79.6) for CARB, 40.9% (9/22; 95% CI: 20.4-61.4) for REO3, 18.2% (4/22; 95% CI: 2.1-34.3) for C. piliforme, M. pulmonis, RPV, and RMV, 9.1% (2/22; 95% CI: 0-21.1) for RTV, and 4.5% (1/22; 95% CI: 0-13.2) for P. carinii and IDIR strain of GBR(Table 1;",
"latex": null,
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"TABREF1": {
"text": "Overall summary of rodent pathogens detected in wild rats from St. Kitts, West Indies. Area A, around the campus of Ross University School of Veterinary Medicine in West Farm, and residential dwellings in Mattingley; Area B, near commercial establishments in downtown Basseterre and Port Zante; Area C, around the campus of the St. Kitts Biomedical Research Foundation (nonhuman primate facility) in Lower Bourryeau Estate. Abbreviations: CARB, cilia-associated respiratory bacillus; H-1, Toolan's H-1 virus; HTNV, Hantaan virus; IDIR strain of GBR, infectious diarrhea of infant rats strain of group B rotavirus (rat rotavirus); KRV, Kilham rat virus; LCMV, lymphocytic choriomeningitis virus; MAV1, mouse adenovirus type 1 (strain FL); MAV2, mouse adenovirus type 2 (strain K87); PVM, pneumonia virus of mice; RCV/SDAV, rat coronavirus/sialodacryoadenitis virus; REO3, reovirus type 3; RMV, rat minute virus; RPV, rat parvovirus; RTV, rat theilovirus; SeV, Sendai virus.",
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"back_matter": [
{
"text": "We thank Ross University School of Veterinary Medicine, Center for One Health and Tropical Medicine for supporting this study.",
"cite_spans": [],
"ref_spans": [],
"section": "Acknowledgments:"
},
{
"text": "The authors declare no conflict of interest.",
"cite_spans": [],
"ref_spans": [],
"section": "Conflicts of Interest:"
}
]
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{
"paper_id": "c890cb0b691543c29b35b5a1351ff8c990739fe2",
"metadata": {
"title": "Prevalence and genetic diversity analysis of human coronaviruses among cross-border children",
"authors": [
{
"first": "Peilin",
"middle": [],
"last": "Liu",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Lei",
"middle": [],
"last": "Shi",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Wei",
"middle": [],
"last": "Zhang",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Jianan",
"middle": [],
"last": "He",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Chunxiao",
"middle": [],
"last": "Liu",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Chunzhong",
"middle": [],
"last": "Zhao",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Siu",
"middle": [
"Kai"
],
"last": "Kong",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Jacky",
"middle": [],
"last": "Fong",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Chuen",
"middle": [],
"last": "Loo",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Dayong",
"middle": [],
"last": "Gu",
"suffix": "",
"affiliation": {},
"email": ""
},
{
"first": "Longfei",
"middle": [],
"last": "Hu",
"suffix": "",
"affiliation": {},
"email": ""
}
]
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"abstract": [
{
"text": "Background: More than a decade after the outbreak of human coronaviruses (HCoVs) SARS in Guangdong province and Hong Kong SAR of China in 2002, there is still no reoccurrence, but the evolution and recombination of the coronaviruses in this region are still unknown. Therefore, surveillance on the prevalence and the virus variation of HCoVs circulation in this region is conducted. Methods: A total of 3298 nasopharyngeal swabs samples were collected from cross-border children (<6 years, crossing border between Southern China and Hong Kong SAR) showing symptoms of respiratory tract infection, such as fever (body temperature > 37.5°C), from 2014 May to 2015 Dec. Viral nucleic acids were analyzed and sequenced to study the prevalence and genetic diversity of the four human coronaviruses. The statistical significance of the data was evaluated with Fisher chi-square test. Results: 78 (2.37%; 95%CI 1.8-2.8%) out of 3298 nasopharyngeal swabs specimens were found to be positive for OC43 (36;1.09%), HKU1 (34; 1.03%), NL63 (6; 0.18%) and 229E (2;0.01%). None of SARS or MERS was detected. The HCoVs predominant circulating season was in transition of winter to spring, especially January and February and NL63 detected only in summer and fall. Complex population with an abundant genetic diversity of coronaviruses was circulating and they shared homology with the published strains (99-100%). Besides, phylogenetic evolutionary analysis indicated that OC43 coronaviruses were clustered into three clades (B,D,E), HKU1 clustered into two clades(A,B) and NL63 clustered into two clades(A,B). Moreover, several novel mutations including nucleotides substitution and the insertion of spike of the glycoprotein on the viral surface were discovered.",
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"text": "Conclusions: The detection rate and epidemic trend of coronaviruses were stable and no obvious fluctuations were found. The detected coronaviruses shared a conserved gene sequences in S and RdRp. However, mutants of the epidemic strains were detected, suggesting continuous monitoring of the human coronaviruses is in need among cross-border children, who are more likely to get infected and transmit the viruses across the border easily, in addition to the general public.",
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"section": "(Continued from previous page)"
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{
"text": "Keywords: Human coronaviruses, Cross-border children, Molecular epidemiology, Phylogenetic analysis, Genetic diversity Background Human coronaviruses (HCoVs) have been causing worldwide outbreak with cases of hospitalization [1] . Six types of coronaviruses (CoVs) are known to infect human: two α-CoVs, i.e. 229E and NL63, two β-CoVs group A, i.e. HKU1 and OC43, β-CoVs group B, i.e. Severe Acute Respiratory Syndrome Coronavirus (SARS-CoV) and β-CoVs group C, i.e. Middle East Respiratory Syndrome Coronavirus (MERS-CoV). SARS-CoV and MERS-CoV, which are highly pathogenic to human lives and have caused serious diseases or death, causes about 10 and 36% mortality respectively. OC43, HKU1, NL63 and 229E are the most common four HCoVs in most regions, circulating worldwide with a detection rate ranging from 1.1 -8.5% and with variations in their predominantly circulating seasons and strains [2] [3] [4] [5] . HCoVs ranks the third in the detection rate of all 17 respiratory viruses in south of China (Guangzhou) and poses a heavy burden to the health care of children as it is associated with acute upper or lower respiratory tract infections, and cases of death have been reported [6] . Moreover, high mutation rates caused by the low fidelity of RNA-dependent RNA polymerase (RdRp) led to high diversity of HCoVs [7] . Several studies about the genetic diversity of human coronaviruses on hospitalized patients had been carried out previously. The new OC43 genotype D based on the recombination of B and C was discovered in 2005 [8] . Two additional recombinants: E (CH) and E (FR) were reported as homologous genome recombination in 2015 [9, 10] . The genetic features of NL63 were reported at least three distinct circulating genotypes (A, B and C) and one recombinant (cluster R) in the United States in 2011 [11] . Meanwhile, HKU1 strains were grouped into three clusters (A, B and C) due to natural recombination [12] . These previous reports focused on hospitalized patients, who have low mobility and seldom cross the border, while this study hereby firstly reports the analysis on crossborder children, mainly including \"cross-boundary students\", who are born and attend school in Hong Kong but reside in Mainland China [13, 14] . A border still exists between Shenzhen in Mainland China and Hong Kong (SZ-HK port) due to the colonial history, resulting in different health care and education systems [13] . Children had a high incidence of coronaviruses infection and \"cross-boundary students\" connecting closely Hong Kong and Mainland China will help us understand the epidemic characteristics of coronaviruses in the Pearl River Delta region. New occurrence of infectious coronaviruses and the known pan-coronavirus variation among this region are of our study interest because the coronaviruses have the potential to threaten global health system and no vaccine is currently available [15, 16] . Therefore, surveillance upon human coronaviruses among this region was carried in this study.",
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"text": "This was a cross-sectional study in molecular epidemiology for coronaviruses infection, and the minimum sample size of this study was 1683 as determined by Z distribution. A total of 3298(>1683) nasopharyngeal swabs samples were collected from children (<6 years) who passed Shenzhen border, linking Southern China and Hong Kong SAR, from 2014 to 2015 and showed symptoms of respiratory tract infection, such as fever (body temperature > 37.5°C) and cough. Written informed consent was obtained from the guardians of all participants before the sample and data collection.",
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"text": "Briefly, nasopharyngeal swab was collected and stored in a sterile EP tube with 5 mL viral transport medium in Shenzhen border. All the samples collected were immediately refrigerated at 2-8°C and transported to the central laboratory of health quarantine of Shenzhen Entry-exit Inspection and Quarantine Bureau (SZCIQ) within the same day and stored at −80°C until analysis.",
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"text": "Viral nucleic acids were extracted from 200 μL respiratory samples using MagNA pure 96 DNA with Viral NA small volume kit (Roche) and EZ1 virus Mini kit V2.0 (Qiagen) according to the manufacturer's instructions. The viral nucleic acids were stored at −80°C until use. For the coronaviruses screening, a quantitative real-time polymerase chain reaction (qRT-PCR) was performed in triplicate using ABI 7500 qRT-PCR thermocycler. The specimens were firstly screened for influenza viruses according to the procedure previously published [17] . Samples of negative results on influenza were then tested for pan-coronavirus as well as 13 other common respiratory viruses. The qRT-PCR master mixture was performed according to the manufacturer's instructions of qRT-PCR Kit (Quant), mainly contained 20.0 μL buffer and 5.0 μL RNA. The thermal cycling conditions were set as follows: reverse transcription at 50°C for 10 min, initial 95°C for 3 min, 40 cycles of PCR amplification at 95°C for 15 s, annealing/elongation at 60°C for 45 s. The partial S (S1 subunit) and RdRp genes were detected in the positive samples after HCoVs screening with the forward (F) and reverse (R) primers listed in Table 1 . The PCR mixture (25 μL) contained 5.0 μL of RNA, PCR buffer mixed with Superscript ®III/PT Taq Kit (Invitrogen) containing 12.5 μl of 2× Rxn Mix,1 μL of forward and reverse primer (10 μM), 1.0 μL of MgSO 4 , 1.0 μL of BSA (0.1%),1.0 μl of Superscript ®III/PT Taq Enzyme, 0.5 μL of RNA Inhibitor, 2.0 μL of nuclease free water. The thermal cycling conditions were set as follows: reverse transcription at 50°C for 30 min, 35 cycles of PCR amplification at 94°C for 30 s, annealing at 50-54°C for 30 s, elongation at 68°C for 150-180 s, final elongation at 68°C for 5 min. Sanger sequencing (Sangon Biotech) of the PCR products of concentration ranging from 50 to 300 ng/μL was performed to study the homology and mutations of samples. Genetic sequence data have been submitted to a publicly available repository (Genbank) and the accessible sequence accession numbers (MF996589-MF996664) including features of the samples and sequences. (Fig. 1a) . The results of the clinical symptoms of these samples were shown in Table 2 .",
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"text": "Males and females shared a common detection rate of all the HCoVs studied and no significant difference was found among the detection rate of the four strains. Also, the p values of Fisher's chi-square test showed no significant difference in detection rates among different origins. The first three clinical symptoms of HCoVs infection were fever (p = 0.08), throat congestion (p = 0.58) and antiadoncus (p = 0.09). Yet, there was no significant difference between HCoVs infected and noninfected patients. For the age group distribution of four HCoVs infections, the infant age group (<1 year old) with weaker respiratory immunity was showed with the highest infection rate in total types of HCoVs infection (p = 0.049) and OC43 infection (p = 0.068) (Fig. 1b) .",
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"text": "There was virus co-infection between human coronaviruses with other common respiratory diseases. Adenovirus(Adv) and Rhinovirus(RV) were the most common two viruses that concomitantly detected with HCoVs in children younger than 6 years old. A total of 40 RdRp genes, including 20 for OC43, 15 for HKU1, 4 for NL63 and 1 for 229E, and 36 S genes, including 16 for OC43, 16 for HKU1 and 4 for NL63, were sequenced to perform phylogenetic analysis. Since there is a high conservative in RdRp gene, phylogenetic tree was not shown here. Multiple alignments results of Fig. 2 Phylogenetic analysis based on partial S genes of OC43, HKU1 and NL63. (I) Phylogenetic tree of OC43 S genes (2.2 kb) constructed with maximum likelihood; (II) Phylogenetic tree of HKU1 S genes (2.4 kb) constructed with maximum likelihood; (III) Phylogenetic tree of NL63 S genes (4.0 kb) constructed with neighbour-joining. Our samples were indicated with a red spot and others were used as referenced strains from complete genomes in GenBank. The strains indicated with \"*\" were clustered into genotype E, recombinant of B, C and D. The OC43 and NL63 phylogenetic trees were constructed using BCoV and Bat CoV respectively as outgroup RdRp genes indicated that OC43 and HKU1 possessed 99-100% nt identities. Largest divergences were observed in HKU1 coronaviruses, which possessed 96 -100% nt identities, but sequences detected in this study were 99-100% homologous to the published strains (Table 3) . For the phylogenetic trees constructed based on 31 S genes with a genomic length over 2 kb of four HCoVs, there was a high level of genetic diversity among those HCoVs (Fig. 2) . The OC43 coronaviruses were clustered into clade B (5,41.7%), clade D (6,50%) and clade E(1,8.3%) while none of the strains of genotype A and C was detected (Fig. 2I) . Besides, there was one OC43 sequence (SW1502-30/2015/Shenzhen, China) being clustered with a new recombination genotype E (CH) (Genbank accession no: KP198611.1). Similarly, HKU1 strains in this study were clustered into clade A (7,46.7%) and clade B (8,53.3%) and related to the sequences detected in Beijing and Hong Kong SAR respectively, while no clade C was detected (Fig. 2 II) . NL63 strains in this study were clustered into clade A (1,25.0%) and clade B (3,75.0%), related to strains isolated from USA and Denmark, while no clade C were detected neither (Fig. 2 III) . Moreover, we found nucleotide mutations in some of the samples (Fig. 3) . Three out of 8 OC43 coronaviruses of genotype D had a total of 11 bases substitution in nucleotide position 25,059-25,112 of S genes (Genbank accession number of referenced strain: KF923904.1) (Fig. 3a) . Six out of 8 HKU1 coronaviruses of genotype B were found with an extra insertion in nucleotide position 24,465 of genome leading to an additional amino acid \"Threonine\" insertion in amino acid position 510 of Spike (Genbank accession of referenced strain: DQ415911.1) (Fig. 3b ).",
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"section": "Molecular screening of virus and amplification, sequencing of RdRp and S genes"
},
{
"text": "The detection rate of total HCoVs was 2.37% (95% CI: 1.8 to 2.8%) in this study was consistent with the previous studies. All the coronaviruses detected have been typed. OC43 was the most common coronaviruses in our study consistent with reports in Guangzhou, Hong Kong, USA and England [4, [18] [19] [20] Fig. 3 Mutation analysis on the S genes of OC43 and HKU1. a Bases substitution in S1 genes of OC43. b Extra insertion in putative RBD of HKU1 that the prevalence of NL63 was similar to or even higher than that of OC43 in Brazil, Kenya and Japan [3, [21] [22] [23] . 229E was detected in low levels throughout years as previous reports and thus the peak activity of 229E could not be determined. The HCoVs predominant circulating season was in transition of winter to spring, especially January and February. NL63 predominant circulating seasons were summer and fall, which were different from those reports of winter and spring in temperate countries, such as the USA and Netherlands [24, 25] . None of the infection was found in the 1-2 years old group, even though the number of sample of this group was higher than that of the infant age group. In summary, we had analyzed the prevalent and clinical characteristics of HCoVs infection in cross-border children in SZ-HK ports. Compared with previous reports, the detection rate and epidemic trend of coronaviruses were stable, and no obvious fluctuations were found. Yet, none of novel infectious coronaviruses, SARS and MERS were detected in this study.",
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"text": "25]",
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"start": 306,
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],
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},
{
"text": "The coronaviruses detected from SZ-HK ports had a high homology with the published strains indicated a stable gene sequences in S and RdRp. However, there were great genetic diversity among these circulating strains. OC43 detected in this report cluster with genotype B, D and E strains, while none of genotypes A and C were detected, probably because genotype A strains had disappeared and genotype C strains were not included in this study [9] . We observed six OC43 coronaviruses were closely related to the genotype B detected from Beijing based on S genes. It possessed 99% nt identities and showed an incongruent phylogenetic relationship between RdRp and S genes. New Recombination genotypes led by high intra-specific diversity have been reported in studying OC43 coronaviruses circulating in France, where eight different recombinants were discovered and confirmed with in silico analysis of complete genomes available using partial genome sequencing [10] . At present, the base substitution and insertion in OC43 and HKU1 is novel and could not find any matches in either OC43 or HKU1 strains in Genbank library. More importantly, these amino acid sites are located in one of the putative regions of HKU1 receptor binding domain [26] . The protein structure and its related function, especially on the efficiency on human infection, need to be investigated in the future.",
"cite_spans": [
{
"start": 442,
"end": 445,
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"start": 960,
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"start": 1239,
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"text": "[26]",
"ref_id": "BIBREF25"
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],
"ref_spans": [],
"section": "Discussion"
},
{
"text": "The detection rate of coronaviruses were in line with previous reports, no novel infectious coronaviruses was detected, the epidemic trend of coronaviruses were stable and all the infectors showed normal respiratory infection symptoms. Besides there were great genetic diversity of coronaviruses detected from SZ-HK ports and all the strains had a high homology compared with the published strains. However, mutant of the epidemic strains detected during our surveillance are increasing, therefore continuous monitoring of the human coronaviruses is in need among cross-border children, who are more likely to get infected and transmit the viruses across the border easily, in addition to the general public. ",
"cite_spans": [],
"ref_spans": [],
"section": "Conclusions"
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}
],
"year": 2012,
"venue": "Hong Kong Med J",
"volume": "18",
"issn": "2",
"pages": "22--26",
"other_ids": {}
},
"BIBREF19": {
"ref_id": "b19",
"title": "Human coronavirus in young children hospitalized foracute respiratory illness and asymptomatic controls",
"authors": [
{
"first": "M",
"middle": [
"M"
],
"last": "Prill",
"suffix": ""
},
{
"first": "M",
"middle": [
"K"
],
"last": "Iwane",
"suffix": ""
},
{
"first": "K",
"middle": [
"M"
],
"last": "Edwards",
"suffix": ""
}
],
"year": 2012,
"venue": "Pediatr Infect Dis J",
"volume": "31",
"issn": "3",
"pages": "235--275",
"other_ids": {}
},
"BIBREF20": {
"ref_id": "b20",
"title": "Infections with human coronaviruses NL63 and OC43 among hospitalised and outpatient individuals in Sao Paulo",
"authors": [
{
"first": "T",
"middle": [
"K"
],
"last": "Cabeca",
"suffix": ""
},
{
"first": "E",
"middle": [],
"last": "Carraro",
"suffix": ""
},
{
"first": "A",
"middle": [],
"last": "Watanabe",
"suffix": ""
},
{
"first": "C",
"middle": [],
"last": "Granato",
"suffix": ""
},
{
"first": "N",
"middle": [],
"last": "Bellei",
"suffix": ""
}
],
"year": 2012,
"venue": "Brazil. J Mem Inst Oswaldo Cruz",
"volume": "107",
"issn": "5",
"pages": "693--697",
"other_ids": {}
},
"BIBREF21": {
"ref_id": "b21",
"title": "Detection of the human coronavirus 229E, HKU1, NL63, and OC43 between 2010 and 2013 in",
"authors": [
{
"first": "Y",
"middle": [],
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},
{
"first": "C",
"middle": [],
"last": "Abiko",
"suffix": ""
},
{
"first": "T",
"middle": [],
"last": "Ikeda",
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},
{
"first": "Y",
"middle": [],
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"middle": [],
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{
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"middle": [],
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{
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},
{
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"middle": [],
"last": "Itagaki",
"suffix": ""
},
{
"first": "F",
"middle": [],
"last": "Katsushima",
"suffix": ""
},
{
"first": "Y",
"middle": [],
"last": "Katasushima",
"suffix": ""
},
{
"first": "K",
"middle": [],
"last": "Mizuta",
"suffix": ""
}
],
"year": 2015,
"venue": "",
"volume": "68",
"issn": "",
"pages": "138--179",
"other_ids": {}
},
"BIBREF22": {
"ref_id": "b22",
"title": "Molecular characterization of human coronaviruses and their circulation dynamics in Kenya",
"authors": [
{
"first": "L",
"middle": [
"A"
],
"last": "Sipulwa",
"suffix": ""
},
{
"first": "J",
"middle": [
"R"
],
"last": "Ongus",
"suffix": ""
},
{
"first": "R",
"middle": [
"L"
],
"last": "Coldren",
"suffix": ""
},
{
"first": "W",
"middle": [
"D"
],
"last": "Bulimo",
"suffix": ""
}
],
"year": 2009,
"venue": "Virol J",
"volume": "13",
"issn": "1",
"pages": "",
"other_ids": {}
},
"BIBREF23": {
"ref_id": "b23",
"title": "Ready, set, fuse! The coronavirus spike protein and acquisition of fusion competence",
"authors": [
{
"first": "T",
"middle": [],
"last": "Heald-Sargent",
"suffix": ""
},
{
"first": "T",
"middle": [],
"last": "Gallagher",
"suffix": ""
}
],
"year": 2012,
"venue": "Viruses",
"volume": "4",
"issn": "4",
"pages": "557--80",
"other_ids": {}
},
"BIBREF24": {
"ref_id": "b24",
"title": "Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats",
"authors": [
{
"first": "S",
"middle": [],
"last": "Pfefferle",
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},
{
"first": "S",
"middle": [],
"last": "Oppong",
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},
{
"first": "J",
"middle": [
"F"
],
"last": "Drexler",
"suffix": ""
},
{
"first": "F",
"middle": [],
"last": "Gloza-Rausch",
"suffix": ""
},
{
"first": "A",
"middle": [],
"last": "Ipsen",
"suffix": ""
},
{
"first": "A",
"middle": [],
"last": "Seebens",
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},
{
"first": "M",
"middle": [
"A"
],
"last": "Muller",
"suffix": ""
},
{
"first": "Anna",
"middle": [
"A"
],
"last": "Vallo",
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},
{
"first": "P",
"middle": [],
"last": "Adu-Sarkodie",
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},
{
"first": "Y",
"middle": [],
"last": "Kruppa",
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},
{
"first": "T",
"middle": [
"F"
],
"last": "Drosten",
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},
{
"first": "C",
"middle": [],
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}
],
"year": 2009,
"venue": "Ghana. Emerg Infect Dis",
"volume": "15",
"issn": "9",
"pages": "1377--84",
"other_ids": {}
},
"BIBREF25": {
"ref_id": "b25",
"title": "Identification of the receptor-binding domain of the spike glycoprotein of human Betacoronavirus HKU1",
"authors": [
{
"first": "Z",
"middle": [],
"last": "Qian",
"suffix": ""
},
{
"first": "X",
"middle": [],
"last": "Ou",
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},
{
"first": "Lgb",
"middle": [],
"last": "Góes",
"suffix": ""
},
{
"first": "C",
"middle": [],
"last": "Osborne",
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},
{
"first": "A",
"middle": [],
"last": "Castano",
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{
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"V"
],
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},
{
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"middle": [
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],
"last": "Dominguez",
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}
],
"year": 2015,
"venue": "J Virol",
"volume": "89",
"issn": "17",
"pages": "8816--8843",
"other_ids": {}
}
},
"ref_entries": {
"FIGREF1": {
"text": "Adv: Adenovirus; Bat CoV: Bat coronavirus; BCoV: Bovine coronavirus; Cox A6: Coxsackievirus A6; EV: Enterovirus; HBoV: Human Bocavirus; HCoVs: Human coronaviruses; MP: Mycoplasma pneumonia; qRT-PCR: Quantitative real-time polymerase chain reaction; RdRp: RNA-dependent RNA polymerase; RSV: Respiratory syncytial virus; RT-PCR: Reverse transcription polymerase chain reaction; RV: Rhinovirus; SZ-HK: Shenzhen-Hong Kong",
"latex": null,
"type": "figure"
},
"TABREF0": {
"text": "PCR primers of RdRp, S genes of four HCoVs Fig. 1 Epidemiological characteristics of human coronaviruses infection among Cross-border children. a Distribution of the four HCoV infections based on Month group. b Distribution of the four HCoV infections based on Age group. Positive and co-infected cases were plotted on the left Y-axis and others were plotted on the right Y-axis. Different strains or total HCoVs were indicated according to the keyStatistical and sequence analysisThe statistical significance of the data was evaluated with SPSS 20.0. All the p-value determined by Fisher's Chisquare test and a p-value <0.05 was considered statistically significant. DNASTAR was used to analyze and illustrate the gene sequences compared with the sequences in NCBI Genbank for homology study.",
"latex": null,
"type": "table"
},
"TABREF1": {
"text": "Statistics of closely related strains of HCoVs based on RdRp and S gene",
"latex": null,
"type": "table"
},
"TABREF2": {
"text": ", but some studies demonstrated",
"latex": null,
"type": "table"
}
},
"back_matter": [
{
"text": "Not applicable. Availability of data and materials Genetic sequence data have been submitted to a publicly available repository (Genbank) with the accessible sequence accession numbers (MF996589-MF996664).",
"cite_spans": [],
"ref_spans": [],
"section": "Acknowledgements"
},
{
"text": "Authors' contributions LS, DG and LH designed the whole project. PL drafted the manuscript. WZ involved amplifying the genes. PL, LS and LH analyzed the data. JH, CL and CZ designed and participated in the virus detection experiment. JFCL and SKK participated in the analysis of coronaviruses sequencing. JFCL, DG and LH provided important guidance and revised the manuscript before submission. All authors read and approved the final manuscript.",
"cite_spans": [],
"ref_spans": [],
"section": "annex"
},
{
"text": "This study was ethically approved by Shenzhen Entry-exit Inspection and Quarantine Bureau, Shenzhen, China. Written informed consent was obtained from the guardians of all participants before the sample and data collection.",
"cite_spans": [],
"ref_spans": [],
"section": "Ethics approval and consent to participate"
},
{
"text": "Not applicable.",
"cite_spans": [],
"ref_spans": [],
"section": "Consent for publication"
},
{
"text": "The authors declare that they have no competing interests.• We accept pre-submission inquiries • Our selector tool helps you to find the most relevant journal Submit your next manuscript to BioMed Central and we will help you at every step:",
"cite_spans": [],
"ref_spans": [],
"section": "Competing interests"
}
]
}
]
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
ids | Array of strings List of BiblioEntry reference IDs. |
OK. The request has succeeded.
value | object (The Result Schema) |
{- "ids": [
- "string"
]
}
{- "value": { }
}
TherapeuticAsset stores details about the research and development (R&D) of coronavirus therapies, e.g., vaccines, diagnostics, and antibodies.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Therapy ID. |
productType | string | Therapy's drug or platform class. |
links | ExternalLink | C3.ai Type ExternalLink. |
description | string | Description of the therapy. |
clinicalTrialsOtherDiseases | string | Other diseases or pathogens for which the therapy has undergone or is undergoing clinical development. |
developer | string | Organization that developed the therapy. |
stageOfDevelopment | string | The therapy's current phase of clinical development. Allowed values: Clinical , Pre-Clinical , Compassionate Use , Phase 1/2 (not yet recruiting) , Phase I , Expanded access . |
fundingSources | string | The organization funding the therapy's R&D. |
nextSteps | string | Anticipated next steps for the therapy's clinical development. |
therapyType | string | The type of therapy. Allowed values: Vaccine , Antibodies , Antivirals , Cell-based therapies , RNA-based therapies , Scanning compounds to repurpose , Dormant Discontinued , Other . |
origin | string | The source of the data containing the therapy's R&D details. Allowed values: WHO , Milken . |
target | string | The virus the therapy targets or treats. Allowed values: COVID-19 , MERS , SARS . |
sources | string | URLs of public sources from which the therapy's information was collected. |
fdaApprovalStatus | string | Details about the status of the therapy's FDA approval. |
clinicalTrialsCovid19 | string | Active clinical trials to evaluate the therapy's efficacy for treating COVID-19. |
lastUpdatedNotes | string | Date on which a specific therapy was last updated. |
publishedResults | string | Publications on the therapy's efficacy for treating COVID-19. |
HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"filter": "origin == 'Milken'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"filter": "origin == 'WHO'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"filter": "therapyType == 'Vaccine'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/therapeuticasset/fetch
Request JSON:
{
"spec": {
"filter": "contains(productType, 'DNA') && stageOfDevelopment == 'Pre-Clinical' && origin == 'WHO' && target == 'COVID-19'"
}
}
Response JSON:
{
"objs": [
{
"productType": "DNA",
"description": "DNA with electroporation",
"developer": "Karolinska Institute / Cobra Biologics (OPENCORONA Project)",
"stageOfDevelopment": "Pre-Clinical",
"therapyType": "Vaccine",
"origin": "WHO",
"target": "COVID-19",
"id": "-3328432098485197346",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T09:58:36Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T09:58:36Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T09:58:36Z",
"fetchInclude": "[]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "DNA",
"description": "DNA plasmid vaccine",
"developer": "Zydus Cadila",
"stageOfDevelopment": "Pre-Clinical",
"therapyType": "Vaccine",
"origin": "WHO",
"target": "COVID-19",
"id": "2177139788646478350",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T09:58:36Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T09:58:36Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T09:58:36Z",
"fetchInclude": "[]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "DNA",
"description": "DNA",
"developer": "Takis/Applied DNA Sciences/Evvivax",
"stageOfDevelopment": "Pre-Clinical",
"therapyType": "Vaccine",
"origin": "WHO",
"target": "COVID-19",
"id": "2966580801280467198",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T09:58:36Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T09:58:36Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T09:58:36Z",
"fetchInclude": "[]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "DNA",
"description": "DNA plasmid vaccine Electroporation device",
"clinicalTrialsOtherDiseases": "Lassa, Nipah, HIV, Filovirus, HPV, Cancer indications, Zika, Hepatitis B",
"developer": "Inovio Pharmaceuticals",
"stageOfDevelopment": "Pre-Clinical",
"therapyType": "Vaccine",
"origin": "WHO",
"target": "COVID-19",
"id": "742688045948574216",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T09:58:36Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T09:58:36Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T09:58:36Z",
"fetchInclude": "[]",
"fetchType": "TherapeuticAsset"
},
"version": 1
},
{
"productType": "DNA",
"description": "DNA plasmid vaccine",
"developer": "Osaka University/ AnGes/ Takara Bio",
"stageOfDevelopment": "Pre-Clinical",
"therapyType": "Vaccine",
"origin": "WHO",
"target": "COVID-19",
"id": "8960724358014432571",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T09:58:36Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T09:58:36Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T09:58:36Z",
"fetchInclude": "[]",
"fetchType": "TherapeuticAsset"
},
"version": 1
}
],
"count": 5,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
ExternalLink stores website URLs cited in the data sources containing the therapies stored in the TherapeuticAssets C3.ai Type.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | External link ID. |
urlType | string | The type of information available at the URL. Allowed values: News (e.g. news article, press release), Clinical Trial , Published Results . |
url | string | The URL of the website. |
therapeuticAsset | TherapeuticAsset | C3.ai Type TherapeuticAsset. |
origin | string | The source of the data containing the therapy's R&D details. Allowed values: WHO , Milken . |
HTTP URL:
https://api.c3.ai/covid/api/1/externallink/fetch
Request JSON:
{
"spec": {
"limit": -1
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/externallink/fetch
Request JSON:
{
"spec": {
"filter": "origin == 'Milken'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/externallink/fetch
Request JSON:
{
"spec": {
"filter": "urlType == 'Clinical Trial'"
}
}
HTTP URL:
https://api.c3.ai/covid/api/1/externallink/fetch
Request JSON:
{
"spec": {
"filter": "therapeuticAsset == 'milkentreatment_036'"
}
}
Response JSON:
{
"objs": [
{
"urlType": "News",
"url": "https://apps.who.int/trialsearch/Trial2.aspx?TrialID=ChiCTR2000030424",
"therapeuticAsset": {
"id": "milkentreatment_036"
},
"origin": "Milken",
"id": "33bf68b9-0860-4046-8717-c8ac8adb5a52",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T10:07:13Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T10:07:13Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T10:07:13Z",
"fetchInclude": "[]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"urlType": "Clinical Trial",
"url": "http://www.chictr.org.cn/showprojen.aspx?proj=50174",
"therapeuticAsset": {
"id": "milkentreatment_036"
},
"origin": "Milken",
"id": "3a8ce559-ce8c-4874-aa89-a3b86a5f61da",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T10:07:13Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T10:07:13Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T10:07:13Z",
"fetchInclude": "[]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"urlType": "Clinical Trial",
"url": "http://www.chictr.org.cn/showprojen.aspx?proj=49532",
"therapeuticAsset": {
"id": "milkentreatment_036"
},
"origin": "Milken",
"id": "a82a982b-a31d-48f0-896a-6a7569554540",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T10:07:13Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T10:07:13Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T10:07:13Z",
"fetchInclude": "[]",
"fetchType": "ExternalLink"
},
"version": 1
},
{
"urlType": "Clinical Trial",
"url": "http://www.chictr.org.cn/showprojen.aspx?proj=50507",
"therapeuticAsset": {
"id": "milkentreatment_036"
},
"origin": "Milken",
"id": "d581a310-f556-4e04-8cce-95508cb714b1",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-08T10:07:13Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-08T10:07:13Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-08T10:07:13Z",
"fetchInclude": "[]",
"fetchType": "ExternalLink"
},
"version": 1
}
],
"count": 4,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
Hospital stores statistics for 6,000+ hospitals in the United States, such as the number of licensed beds, staffed beds, intensive care unit (ICU) beds, and bed utilization rate.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
name | string | Hopsital name. |
location | OutbreakLocation | C3.ai Type OutbreakLocation associated with hospital. |
hospitalType | string | Hospital type. Examples include Short Term Acute Care Hospital , Critical Access Hospital , and VA Hospital . |
address | string | Hospital address. |
lat | float | Hospital's latitude. |
lon | float | Hospital's longitude. |
licensedBeds | int | Maximum number of beds the hospital holds the license to operate. |
staffedBeds | int | Number of adult, pediatric, birthing room, and ICU beds maintained in patient care areas of the hospital. |
icuBeds | int | Number of intensive care unit (ICU) beds in the hospital. |
icuBedsAdult | int | Number of ICU beds for adults in the hospital. |
icuBedsPedi | int | Number of pediatric ICU beds in the hospital. |
icuBedsPotential | int | Potential increase in bed capacity in the hospital, computed as the number of licensed beds minus the number of staffed beds. |
ventilatorUsage | int | Hospital's average number of ventilators in use. |
bedUtilization | float | Hospital's average bed utilization rate, computed based on the Medicare Cost Report as the total number of patient days (excluding nursery days) divided by the available bed days. |
HTTP URL:
https://api.c3.ai/covid/api/1/hospital/fetch
Request JSON:
{
"spec": {
"filter": "contains(location, 'Oklahoma')"
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Adair_Oklahoma_UnitedStates"
},
"name": "Stilwell Memorial Hospital",
"hospitalType": "Short Term Acute Care Hospital",
"address": "1401 W Locust St,Stilwell,74960,OK,USA",
"staffedBeds": 30,
"licensedBeds": 67,
"icuBeds": 5,
"icuBedsAdult": 5,
"icuBedsPedi": 0,
"bedUtilization": 0.49452,
"icuBedsPotential": 37,
"ventilatorUsage": 1,
"lat": 35.8089,
"lon": -94.6429,
"id": "3019",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-23T09:11:12Z",
"createdBy": "dataloader",
"updated": "2020-04-23T09:11:12Z",
"updatedBy": "dataloader",
"timestamp": "2020-04-23T09:12:07Z",
"sourceFile": "definitive.csv",
"fetchInclude": "[]",
"fetchType": "Hospital"
},
"version": 1
},
...
],
"count": 158,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
Diagnosis stores basic clinical data (e.g. clinical notes, demographics, test results, X-ray or CT scan images) about individual patients tested for COVID-19, from research papers and healthcare institutions.
The fetch
API provides tabular clinical data, while the getimageurls
API provides accessible URLs for X-ray or CT scan images.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
source | string | Data source for the patient records. Allowed values: Montreal (University of Montreal), Braid (Carbon Health & Braid Health). |
imageURL | string | URL hosting the patient's X-ray or CT scan images. |
location | OutbreakLocation | C3.ai Type OutbreakLocation representing the location of the patient. |
idPatient | string | Unique patient ID. |
age | float | Patient's age, with noise added to protect patient privacy. |
clinicalNotes | string | A short paragraph containing clinical notes about the patient. |
temperature | float | Patient's temperature, in degrees Celsius. |
diagnostics | DiagnosisDetail | C3.ai Type DiagnosisDetail containing associated patient-specific details. |
testResults | string | Patient's test results. Examples include COVID-19: Negative , COVID-19: Positive , ARDS: positive , and Streptococcus: positive . |
HTTP URL:
https://api.c3.ai/covid/api/1/diagnosis/fetch
Request JSON:
{
"spec" : {
"filter": "contains(testResults, 'COVID-19')", include: "this, diagnostics.source, diagnostics.key, diagnostics.value"
}
}
Response JSON:
{
"objs": [
{
"diagnostics": [
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "date",
"value": "2020",
"source": "Montreal",
"id": "date_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "folder",
"value": "images",
"source": "Montreal",
"id": "folder_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "hospital",
"value": "Italy",
"source": "Montreal",
"id": "hospital_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "modality",
"value": "X-ray",
"source": "Montreal",
"id": "modality_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "offset",
"value": "5.0",
"source": "Montreal",
"id": "offset_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "other_notes",
"value": "Credit to Izzo Andrea, D'Aversa Lucia, Ceremonial Giuseppe, Mazzella Giuseppe, Pergoli Pericle, Faiola Eugenio Leone, Di Pastena Francesca",
"source": "Montreal",
"id": "other_notes_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "pO2_saturation",
"value": "70.0",
"source": "Montreal",
"id": "pO2_saturation_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "sex",
"value": "F",
"source": "Montreal",
"id": "sex_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "url",
"value": "https://www.sirm.org/2020/03/10/covid-19-caso-26/",
"source": "Montreal",
"id": "url_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "view",
"value": "PA",
"source": "Montreal",
"id": "view_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"fetchInclude": "[id,source,key,value,parent,version]",
"fetchType": "DiagnosisDetail"
},
"version": 1
}
],
"imageUrl": "MONTREAL/images/01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"source": "Montreal",
"location": {
"id": "Italy"
},
"idPatient": "46",
"age": 55.0,
"testResults": "COVID-19: positive",
"clinicalNotes": "Woman, 55 years old, reports dyspnea for a few days, does not report fever. In the history of asthma and type II diabetes. At first he denies contacts with people in a feverish state and coming from areas at risk. After a more accurate and \"insistent\" anamnesis, he reports that the cohabiting son works in a company where COVID-19 cases have occurred in the risk area (Lombardy).",
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:17Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:17Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:17Z",
"fetchInclude": "[this,{diagnostics:[id,source,key,value]}]",
"fetchType": "Diagnosis"
},
"version": 1
},
...
],
"count": 1882,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/diagnosis/fetch
Request JSON:
{
"spec": {
"filter": "contains(lowerCase(testResults), 'positive')"
}
}
Response JSON:
{
"objs": [
{
"imageUrl": "MONTREAL/images/01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"source": "Montreal",
"location": {
"id": "Italy"
},
"idPatient": "46",
"age": 55.0,
"testResults": "COVID-19: positive",
"clinicalNotes": "Woman, 55 years old, reports dyspnea for a few days, does not report fever. In the history of asthma and type II diabetes. At first he denies contacts with people in a feverish state and coming from areas at risk. After a more accurate and \"insistent\" anamnesis, he reports that the cohabiting son works in a company where COVID-19 cases have occurred in the risk area (Lombardy).",
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:17Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:17Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:17Z",
"fetchInclude": "[]",
"fetchType": "Diagnosis"
},
"version": 1
},
...
],
"count": 461,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
This API returns the image URL for each requested Diagnosis ID. The image URL can then be used to access the associated X-ray or CT scan image.
HTTP URL:
https://api.c3.ai/covid/api/1/diagnosis/getimageurls
Request JSON:
{
"ids": [
"01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"1-s2.0-S1684118220300682-main.pdf-003-b1.png"
]
}
Response JSON:
{
"type": "ObjMapp",
"value": {
"01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg": {
"type": "string",
"value": "https://..."
},
"1-s2.0-S1684118220300682-main.pdf-003-b1.png": {
"type": "string",
"value": "https://..."
}
}
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
ids | Array of strings List of diagnostic image identifiers |
OK. The request has succeeded.
type | string |
value | object Map from diagnostic image identifiers to image locations |
{- "ids": [
- "string"
]
}
{- "type": "string",
- "value": { }
}
DiagnosisDetail stores detailed clinical data (e.g. lab tests, pre-existing conditions, symptoms) about individual patients in key-value format. DiagnosisDetail holds specific types of information depending on the source dataset and availability of data for different patients. For example, the date of testing and data on presence of pre-existing conditions may be available for some patients, while lab tests such as blood oxygen level may be available for others.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
source | string | Data source for the patient records. Allowed values: Montreal (University of Montreal), Braid (Carbon Health & Braid Health). |
parent | Diagnosis | C3.ai Type Diagnosis representing other data related to this patient. |
key | string | The data type being stored. Examples include date , pO2_saturation , and asthma . |
value | string | The value for the associated key. Examples include February 6, 2020 , 91.0 , and True . |
HTTP URL:
https://api.c3.ai/covid/api/1/diagnosisdetail/fetch
Request JSON:
{
"spec": {
"filter": "parent.id == '01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg'"
}
}
Response JSON:
{
"objs": [
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "date",
"value": "2020",
"source": "Montreal",
"id": "date_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "folder",
"value": "images",
"source": "Montreal",
"id": "folder_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "hospital",
"value": "Italy",
"source": "Montreal",
"id": "hospital_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "modality",
"value": "X-ray",
"source": "Montreal",
"id": "modality_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "offset",
"value": "5.0",
"source": "Montreal",
"id": "offset_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "other_notes",
"value": "Credit to Izzo Andrea, D'Aversa Lucia, Ceremonial Giuseppe, Mazzella Giuseppe, Pergoli Pericle, Faiola Eugenio Leone, Di Pastena Francesca",
"source": "Montreal",
"id": "other_notes_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "pO2_saturation",
"value": "70.0",
"source": "Montreal",
"id": "pO2_saturation_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "sex",
"value": "F",
"source": "Montreal",
"id": "sex_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "url",
"value": "https://www.sirm.org/2020/03/10/covid-19-caso-26/",
"source": "Montreal",
"id": "url_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
},
{
"parent": {
"id": "01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg"
},
"key": "view",
"value": "PA",
"source": "Montreal",
"id": "view_01E392EE-69F9-4E33-BFCE-E5C968654078.jpeg",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-04-27T12:35:18Z",
"createdBy": "santiago.lopez@c3iot.com",
"updated": "2020-04-27T12:35:18Z",
"updatedBy": "santiago.lopez@c3iot.com",
"timestamp": "2020-04-27T12:35:18Z",
"fetchInclude": "[]",
"fetchType": "DiagnosisDetail"
},
"version": 1
}
],
"count": 10,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
VaccineCoverage stores historical vaccination rates for various demographic groups in US counties and states, based on data from the US Centers for Disease Control and Prevention (CDC).
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
location | OutbreakLocation | C3.ai Type OutbreakLocation affiliated with this vaccine coverage data. |
vaxView | string | CDC VaxView source of the data. Allowed values: Child, School, Teenager, Adult, Influenza. |
year | int | Year the vaccination rate was estimated. |
timestamp | datetime | Year the vaccination rate was estimated, as a datetime. |
value | double | Estimated percent of demographic group that is vaccinated. |
lowerLimit | double | Lower limit of 95% confidence interval on value. |
upperLimit | double | Upper limit of 95% confidence interval on value. |
confidenceInterval | double | Size of confidence interval on value, i.e., there is a 95% probability that the demographic group's true vaccination rate falls within the value minus this interval and the value plus this interval. |
target | double | Target vaccination rate for this population group. |
sampleSize | int | Number of individuals in the sample used to estimate the population vaccination rate. |
vaccineDetails | string | Details about the vaccine, e.g. >=3 doses HPV Vaccination, Tetanus (Td or Tdap) Vaccination, or >=2 doses MMR Vaccination. |
demographicClass | string | Characteristic by which the population was divided into demographic groups, e.g. Poverty, Race/Ethnicity, or Urbanicity. |
demographicClassDetails | string | Details about the demographic group surveyed, e.g. Ages 13-17, All kindergartners, or Hispanic. |
totalPopulation | int | Total population of the demographic group at the time of survey. |
surveyType | string | Type of survey conducted, e.g. Stratified 2-stage cluster sample or Census. |
percentSurveyed | double | Percentage of the demographic group surveyed to determine vaccination rate estimate. |
kindergartenPopulation | int | Total population of kindergarten students at the time of survey. |
HTTP URL:
https://api.c3.ai/covid/api/1/vaccinecoverage/fetch
Request JSON:
{
"spec": {
"filter": "demographicClassDetails == '13-17 Years' && contains(vaccineDetails, '>=1 dose MenACWY') && location == 'NewYork_UnitedStates'"
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2016,
"timestamp": "2016-01-01T00:00:00Z",
"value": 89.2,
"lowerLimit": 86.0,
"upperLimit": 91.8,
"sampleSize": 655,
"confidenceInterval": 2.9,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "1abde61b-a5c7-4ac2-a8b8-eed8cbb218a3",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2014,
"timestamp": "2014-01-01T00:00:00Z",
"value": 79.6,
"lowerLimit": 75.1,
"upperLimit": 83.5,
"sampleSize": 594,
"confidenceInterval": 4.2,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "1e393b54-204b-4255-8fde-751a6d8f65cc",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2009,
"timestamp": "2009-01-01T00:00:00Z",
"value": 62.9,
"lowerLimit": 57.7,
"upperLimit": 67.8,
"sampleSize": 539,
"confidenceInterval": 5.0,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "5b8fa5bb-71ab-429a-b305-d832315770e9",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2011,
"timestamp": "2011-01-01T00:00:00Z",
"value": 74.9,
"lowerLimit": 70.9,
"upperLimit": 78.5,
"sampleSize": 840,
"confidenceInterval": 3.8,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "9092dfef-7488-4695-845a-c369412be903",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2012,
"timestamp": "2012-01-01T00:00:00Z",
"value": 78.5,
"lowerLimit": 74.1,
"upperLimit": 82.3,
"sampleSize": 627,
"confidenceInterval": 4.1,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "b16c14fe-89e5-461e-9933-9c2ffa06313b",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2010,
"timestamp": "2010-01-01T00:00:00Z",
"value": 71.2,
"lowerLimit": 66.5,
"upperLimit": 75.4,
"sampleSize": 701,
"confidenceInterval": 4.5,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "bec1260f-e3f5-410e-8ec1-60d38a65ea6b",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2008,
"timestamp": "2008-01-01T00:00:00Z",
"value": 56.0,
"lowerLimit": 51.1,
"upperLimit": 60.8,
"sampleSize": 600,
"confidenceInterval": 4.8,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "c4c44ae6-05f4-4892-9a74-7b3f886ca625",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2015,
"timestamp": "2015-01-01T00:00:00Z",
"value": 86.2,
"lowerLimit": 82.9,
"upperLimit": 89.0,
"sampleSize": 665,
"confidenceInterval": 3.1,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "cf2e5495-3dc9-45c3-ba74-dfe3453706fe",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2018,
"timestamp": "2018-01-01T00:00:00Z",
"value": 94.9,
"lowerLimit": 92.0,
"upperLimit": 96.8,
"sampleSize": 535,
"confidenceInterval": 2.3,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "e982d16c-7700-42a2-b4c4-0b3c6ff5ca64",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2017,
"timestamp": "2017-01-01T00:00:00Z",
"value": 89.3,
"lowerLimit": 85.9,
"upperLimit": 91.9,
"sampleSize": 651,
"confidenceInterval": 3.0,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "f6385fa2-af92-42e1-a630-660370b46ac7",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "NewYork_UnitedStates"
},
"vaxView": "Teenager",
"year": 2013,
"timestamp": "2013-01-01T00:00:00Z",
"value": 83.3,
"lowerLimit": 79.7,
"upperLimit": 86.4,
"sampleSize": 710,
"confidenceInterval": 3.4,
"vaccineDetails": ">=1 dose MenACWY Vaccination ",
"demographicClass": " Age",
"demographicClassDetails": "13-17 Years",
"id": "fe0b26f6-5ee2-46d7-b94c-969ec0781684",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:28:22Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:28:22Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:29:31Z",
"sourceFile": "TeenagerMeningococcalVaccination-2008-2018_NORMALIZED_FORMATTED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
}
],
"count": 11,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/vaccinecoverage/fetch
Request JSON:
{
"spec": {
"filter": "vaxView == 'Influenza' && contains(vaccineDetails, 'General Population') && location == 'California_UnitedStates' && contains(demographicClass, 'Race/ethnicity') && year == 2018"
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "California_UnitedStates"
},
"vaxView": "Influenza",
"year": 2018,
"timestamp": "2018-01-01T00:00:00Z",
"value": 44.6,
"lowerLimit": 41.8,
"upperLimit": 47.4,
"sampleSize": 3200,
"confidenceInterval": 2.8,
"vaccineDetails": "Influenza vaccination (General Population) ",
"demographicClass": " Race/ethnicity",
"demographicClassDetails": "Hispanic",
"target": 70.0,
"id": "54effd25-3f85-4138-a6aa-b635949093e7",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:27:46Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:27:46Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:27:58Z",
"sourceFile": "InfluenzaVaccine-2010-2019-GeneralPopulation_FLATTENED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "California_UnitedStates"
},
"vaxView": "Influenza",
"year": 2018,
"timestamp": "2018-01-01T00:00:00Z",
"value": 40.8,
"lowerLimit": 32.6,
"upperLimit": 49.0,
"sampleSize": 500,
"confidenceInterval": 8.2,
"vaccineDetails": "Influenza vaccination (General Population) ",
"demographicClass": " Race/ethnicity",
"demographicClassDetails": "Black only, non-Hispanic",
"target": 70.0,
"id": "6b3d8a3e-e296-4a51-a878-cf18b5974d7c",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:27:46Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:27:46Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:27:58Z",
"sourceFile": "InfluenzaVaccine-2010-2019-GeneralPopulation_FLATTENED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "California_UnitedStates"
},
"vaxView": "Influenza",
"year": 2018,
"timestamp": "2018-01-01T00:00:00Z",
"value": 52.3,
"lowerLimit": 49.9,
"upperLimit": 54.7,
"sampleSize": 4602,
"confidenceInterval": 2.4,
"vaccineDetails": "Influenza vaccination (General Population) ",
"demographicClass": " Race/ethnicity",
"demographicClassDetails": "White only, non-Hispanic",
"target": 70.0,
"id": "860bb1b6-95c1-4e34-8f32-318af2b9391a",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:27:46Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:27:46Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:27:58Z",
"sourceFile": "InfluenzaVaccine-2010-2019-GeneralPopulation_FLATTENED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
},
{
"location": {
"id": "California_UnitedStates"
},
"vaxView": "Influenza",
"year": 2018,
"timestamp": "2018-01-01T00:00:00Z",
"value": 45.0,
"lowerLimit": 40.6,
"upperLimit": 49.4,
"sampleSize": 1332,
"confidenceInterval": 4.4,
"vaccineDetails": "Influenza vaccination (General Population) ",
"demographicClass": " Race/ethnicity",
"demographicClassDetails": "Other or multiple races, non-Hispanic",
"target": 70.0,
"id": "a5971830-49d9-46cc-af62-1bb4322c5b00",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T23:27:46Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:27:46Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T23:27:58Z",
"sourceFile": "InfluenzaVaccine-2010-2019-GeneralPopulation_FLATTENED.csv",
"fetchInclude": "[]",
"fetchType": "VaccineCoverage"
},
"version": 1
}
],
"count": 4,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
ClinicalTrial stores metadata for all clinical trials related to COVID-19 being conducted worldwide.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Trial ID supplied by clinical trials registry. |
url | string | Web link to entry in registry database. |
string | Web link to summary of trial. | |
location | OutbreakLocation | C3.ai Type OutbreakLocation where trial is taking place. |
startDate | datetime | Start date of the trial. |
endDate | datetime | Planned or actual completion date of the trial. |
trialStatus | string | Current status of the trial, e.g. recruiting, planned, or completed. |
design | string | Randomization or other technical study criteria, e.g. Randomised or Single-arm. |
blinding | string | Concealing or blinding of group allocation from one or more participants in the trial, e.g. Single, Double, or Open-Label. |
arms | int | Number of treatment groups under observation. |
covid19Status | string | Scope of participant conditions specified by study, e.g. Healthy (Exposed), Confirmed, or Resolved. |
severity | string | Relative condition of participants under study, e.g. Non-severe, Severe, or Mixed. |
patientSetting | string | Treatment environment of trial participants, e.g. Hospital, ICU, or Outpatient. |
outcome | string | The result of a treatment or intervention used to measure efficacy. |
treatmentType | string | The drug or therapy under evaluation. |
size | int | Number of participants. |
HTTP URL:
https://api.c3.ai/covid/api/1/clinicaltrial/fetch
Request JSON:
{
"spec": {
"filter": "(contains(treatmentType,'HCQ') || contains(treatmentType,'AZT')) && startDate >= '2020-01-01'"
}
}
Response JSON:
{
"objs": [
{
"url": "https://www.clinicaltrialsregister.eu/ctr-search/trial/2020-000890-25/FR/",
"pdf": "https://www.sciencedirect.com/science/article/pii/S0924857920300996",
"country": "France",
"location": {
"id": "Paris_France"
},
"startDate": "2020-03-01T00:00:00Z",
"trialStatus": "Completed w. Results",
"design": "Unspecified",
"blinding": "Unspecified",
"covid19Status": "Confirmed",
"patientSetting": "Hospital",
"outcome": "Mortality, Hospitalization, Viral Load or Clearance, Fever, Respiratory Rate",
"treatmentType": "HCQ",
"id": "2020-000890-25_Paris_France",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T04:29:06Z",
"createdBy": "dataloader",
"updated": "2020-05-29T04:29:06Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T04:29:26Z",
"sourceFile": "LancetClincalTrialsTracker_05_28_2020.csv",
"fetchInclude": "[]",
"fetchType": "ClinicalTrial"
},
"version": 1
},
{
"url": "https://www.clinicaltrialsregister.eu/ctr-search/trial/2020-000982-18/NO/",
"country": "Norway",
"location": {
"id": "Oslo_Norway"
},
"startDate": "2020-03-01T00:00:00Z",
"trialStatus": "Recruiting",
"design": "Randomised",
"blinding": "Open-Label",
"arms": 3,
"covid19Status": "Confirmed",
"severity": "Severe",
"patientSetting": "Hospital, ICU",
"outcome": "Mortality, ICU Admission, Invasive Mechanical Ventilation or ECMO, Serious or Seconday Infections, Organ Failure or Dysfunction (SOFA), Adverse Events, Treatment-emergent Adverse Events, eGFR, Quality of Life",
"treatmentType": "HCQ, Remdesivir",
"id": "2020-000982-18_Oslo_Norway",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T04:29:06Z",
"createdBy": "dataloader",
"updated": "2020-05-29T04:29:06Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T04:29:26Z",
"sourceFile": "LancetClincalTrialsTracker_05_28_2020.csv",
"fetchInclude": "[]",
"fetchType": "ClinicalTrial"
},
"version": 1
},
...
],
"count": 417,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/clinicaltrial/fetch
Request JSON:
{
"spec": {
"filter": "(contains(patientSetting, 'ICU') && contains(trialStatus, 'Complete'))"
}
}
Response JSON:
{
"objs": [
{
"url": "http://en.irct.ir/trial/47197",
"country": "Iran",
"location": {
"id": "Tehran_Iran"
},
"startDate": "2020-05-01T00:00:00Z",
"endDate": "2019-08-01T00:00:00Z",
"trialStatus": "Completed",
"design": "Randomised",
"blinding": "Double",
"arms": 2,
"covid19Status": "Confirmed",
"severity": "Moderate/Severe",
"patientSetting": "ICU",
"outcome": "Blood Gas",
"treatmentType": "Plasma based therapy",
"size": 30,
"id": "IRCT20091012002582N21_Tehran_Iran",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T04:29:06Z",
"createdBy": "dataloader",
"updated": "2020-05-29T04:29:06Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T04:29:26Z",
"sourceFile": "LancetClincalTrialsTracker_05_28_2020.csv",
"fetchInclude": "[]",
"fetchType": "ClinicalTrial"
},
"version": 1
},
{
"url": "http://en.irct.ir/trial/46623",
"country": "Iran",
"location": {
"id": "Tehran_Iran"
},
"startDate": "2020-03-01T00:00:00Z",
"endDate": "2020-04-01T00:00:00Z",
"trialStatus": "Completed",
"design": "Randomised",
"blinding": "Double",
"arms": 2,
"covid19Status": "Confirmed",
"severity": "Unclear",
"patientSetting": "ICU",
"outcome": "Mortality, Pneumonia or ARDS, C-Reactive Protein, Procalcitonin, CD4, CD8, Radiographic Findings",
"treatmentType": "Stem cells",
"size": 10,
"id": "IRCT20140528017891N8_Tehran_Iran",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-29T04:29:06Z",
"createdBy": "dataloader",
"updated": "2020-05-29T04:29:06Z",
"updatedBy": "dataloader",
"timestamp": "2020-05-29T04:29:26Z",
"sourceFile": "LancetClincalTrialsTracker_05_28_2020.csv",
"fetchInclude": "[]",
"fetchType": "ClinicalTrial"
},
"version": 1
},
...
],
"count": 10,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
LocationPolicySummary stores COVID-19 social distancing and health policies and regulations enacted by US states.
The fetch
API provides current policy data, while the allversionsforpolicy
API provides both historical and current policy data.
The Policy
type is deprecated. To query policy data from Kaiser Family Foundation, please use LocationPolicySummary
instead.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
location | OutbreakLocation | C3.ai Type OutbreakLocation where the policy was enacted. |
easingOrder | string | "Yes" if the location is easing their social distancing measures, "No" otherwise. |
stayAtHome | string | Description of the latest status of the stay-at-home order. |
mandatoryQuarantine | string | Description of status of mandatory quarantine for travelers. |
nonEssentialBusiness | string | Description of restrictions on non-essential businesses. |
largeGatherings | string | Description of restrictions on large gatherings. |
schoolClosure | string | Description of school closures or restrictions. |
restaurantLimit | string | Description of restrictions on restaurants. |
PrimaryElectionPostponement | string | Description of postponement or cancellation of primary elections. |
emergencyDeclaration | string | "Yes" if a state of emergency was declared, "No" otherwise. |
waiveTreatmentCost | string | Description of policies regarding cost sharing for COVID-19 treatment. |
freeVaccine | string | Description of policies requiring free cost COVID-19 vaccines when available. |
waiverOfPriorAuthorizationRequirements | string | Description of policies requiring a waiver of prior authorization requirements. May be superseded by the federal Families First Coronavirus Response Act. |
prescriptionRefill | string | Description of policies regrading early prescriptions refills. |
premiumPaymentGracePeriod | string | Description of policies regarding premium payment grace periods. |
marketplaceSpecialEnrollmentPeriod | string | "Yes" if the special enrollment period for the state's insurance marketplace extended, "No" otherwise. |
section1135Waiver | string | Description of approval status of the Section 1135 waiver. |
paidSickLeaves | string | Description of status of paid sick leave policies adding to federal emergency leave. |
expandsAccesstoTelehealthServices | string | "Yes" if expanded access to Tele-health services are issued, "No" otherwise. |
lastSavedTimestamp | datetime | Datetime of last update for this version. |
version | int | Incrementing version ID for all policies. |
versionDate | datetime | Date of the policy version. |
numSavedVersions | int | Total number of versions of this policy available with allversionsforpolicy . |
savedVersion | int | Incrementing version ID for this policy. |
HTTP URL:
https://api.c3.ai/covid/api/1/locationpolicysummary/fetch
Request JSON:
{
"spec" : {
"filter": "location == 'Pennsylvania_UnitedStates'",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Pennsylvania_UnitedStates"
},
"versionDate": "2020-05-29T00:00:00Z",
"easingOrder": "Yes",
"stayAtHome": "Lifted",
"mandatoryQuarantine": "No Action",
"nonEssentialBusiness": "Some Non-Essential Businesses Permitted to Reopen",
"largeGatherings": "Expanded to New Limit of 25",
"schoolClosure": "Closed for School Year",
"restaurantLimit": "Closed Except for Takeout/Delivery",
"PrimaryElectionPostponement": "No",
"emergencyDeclaration": "Yes",
"waiveTreatmentCost": "No Action",
"freeVaccine": "No Action",
"waiverOfPriorAuthorizationRequirements": "For COVID-19 Testing",
"prescriptionRefill": "No Action",
"premiumPaymentGracePeriod": "No Action",
"marketplaceSpecialEnrollmentPeriod": "No",
"section1135Waiver": "Approved",
"paidSickLeaves": "No Action",
"expandsAccesstoTelehealthServices": "No",
"id": "Pennsylvania_UnitedStates_Policy",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:57:50Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:15:11Z",
"updatedBy": "elliot.kirk@c3iot.com",
"timestamp": "2020-05-29T23:15:11Z",
"sourceFile": "StateSocialDistancingActionsMay29_cleaned.csv",
"fetchInclude": "[]",
"fetchType": "Policy"
},
"version": 10,
"lastSavedTimestamp": "2020-05-29T23:15:11Z",
"numSavedVersions": 4,
"savedVersion": 4
}
],
"count": 1,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
This API returns all historical versions of a policy, in addition to the current policy version returned by fetch
.
HTTP URL:
https://api.c3.ai/covid/api/1/locationpolicysummary/allversionsforpolicy
Request JSON:
{
"this": {
"id": "California_UnitedStates_Policy"
}
}
Response JSON:
[
{
"location": {
"id": "California_UnitedStates"
},
"versionDate": "2020-05-29T00:00:00Z",
"easingOrder": "Yes",
"stayAtHome": "Statewide",
"mandatoryQuarantine": "No Action",
"nonEssentialBusiness": "Some Non-Essential Businesses Permitted to Reopen with Reduced Capacity",
"largeGatherings": "All Gatherings Prohibited",
"schoolClosure": "Recommended Closure for School Year",
"restaurantLimit": "Closed Except for Takeout/Delivery",
"PrimaryElectionPostponement": "No",
"emergencyDeclaration": "Yes",
"waiveTreatmentCost": "No Action",
"freeVaccine": "No Action",
"waiverOfPriorAuthorizationRequirements": "No Action",
"prescriptionRefill": "State Requires",
"premiumPaymentGracePeriod": "No Action",
"marketplaceSpecialEnrollmentPeriod": "Active",
"section1135Waiver": "Approved",
"paidSickLeaves": "Enacted",
"expandsAccesstoTelehealthServices": "Yes",
"id": "California_UnitedStates_Policy",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:57:50Z",
"createdBy": "dataloader",
"updated": "2020-05-29T23:15:10Z",
"updatedBy": "elliot.kirk@c3iot.com",
"timestamp": "2020-05-29T23:15:10Z",
"sourceFile": "StateSocialDistancingActionsMay29_cleaned.csv",
"fetchInclude": "[this,versionEdits]",
"fetchType": "Policy"
},
"version": 10,
"lastSavedTimestamp": "2020-05-29T23:15:10Z",
"numSavedVersions": 4,
"savedVersion": 4
},
{
"location": {
"id": "California_UnitedStates"
},
"easingOrder": "No",
"stayAtHome": "Statewide",
"mandatoryQuarantine": "No Action",
"nonEssentialBusiness": "All Non-Essential Businesses Closed",
"largeGatherings": "All Gatherings Prohibited",
"schoolClosure": "Recommended Closure for School Year",
"restaurantLimit": "Closed Except for Takeout/Delivery",
"PrimaryElectionPostponement": "No",
"emergencyDeclaration": "Yes",
"waiveTreatmentCost": "No Action",
"freeVaccine": "No Action",
"waiverOfPriorAuthorizationRequirements": "No Action",
"prescriptionRefill": "State Requires",
"premiumPaymentGracePeriod": "No Action",
"marketplaceSpecialEnrollmentPeriod": "Yes",
"section1135Waiver": "Approved",
"paidSickLeaves": "Enacted",
"id": "California_UnitedStates_Policy",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:57:50Z",
"createdBy": "dataloader",
"updated": "2020-05-29T19:39:11Z",
"updatedBy": "elliot.kirk@c3iot.com",
"timestamp": "2020-05-29T19:39:11Z",
"sourceFile": "StateSocialDistancingPolicies_05012020_cleaned.csv",
"fetchInclude": "[this,versionEdits]",
"fetchType": "Policy"
},
"version": 7,
"lastSavedTimestamp": "2020-05-29T19:39:11Z",
"numSavedVersions": 3,
"savedVersion": 3
},
{
"location": {
"id": "California_UnitedStates"
},
"easingOrder": "No",
"stayAtHome": "Statewide",
"mandatoryQuarantine": "No Action",
"nonEssentialBusiness": "All Non-Essential Businesses Closed",
"largeGatherings": "All Gatherings Prohibited",
"schoolClosure": "Recommended Closure for School Year",
"restaurantLimit": "Closed Except for Takeout/Delivery",
"emergencyDeclaration": "Yes",
"waiveTreatmentCost": "No Action",
"freeVaccine": "No Action",
"waiverOfPriorAuthorizationRequirements": "No Action",
"prescriptionRefill": "State Requires",
"premiumPaymentGracePeriod": "No Action",
"marketplaceSpecialEnrollmentPeriod": "Yes",
"section1135Waiver": "Approved",
"paidSickLeaves": "Enacted",
"id": "California_UnitedStates_Policy",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:57:50Z",
"createdBy": "dataloader",
"updated": "2020-05-05T04:59:27Z",
"updatedBy": "ethan.ho@c3iot.com",
"timestamp": "2020-05-05T04:59:27Z",
"sourceFile": "StateSocialDistancingPolicies_05012020_cleaned.csv",
"fetchInclude": "[this,versionEdits]",
"fetchType": "Policy"
},
"version": 5,
"lastSavedTimestamp": "2020-05-05T04:59:27Z",
"numSavedVersions": 2,
"savedVersion": 2
},
{
"location": {
"id": "California_UnitedStates"
},
"easingOrder": "No",
"stayAtHome": "Statewide",
"mandatoryQuarantine": "No Action",
"nonEssentialBusiness": "All Non-Essential Businesses",
"largeGatherings": "All Gatherings Prohibited",
"schoolClosure": "Recommended Closure for School Year",
"restaurantLimit": "Closed Except for Takeout/Delivery",
"emergencyDeclaration": "Yes",
"waiveTreatmentCost": "No Action",
"freeVaccine": "No Action",
"waiverOfPriorAuthorizationRequirements": "No Action",
"prescriptionRefill": "State Requires",
"premiumPaymentGracePeriod": "No Action",
"marketplaceSpecialEnrollmentPeriod": "Yes",
"section1135Waiver": "Approved",
"paidSickLeaves": "Enacted",
"id": "California_UnitedStates_Policy",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-05-05T04:57:50Z",
"createdBy": "dataloader",
"updated": "2020-05-05T04:58:29Z",
"updatedBy": "ethan.ho@c3iot.com",
"timestamp": "2020-05-05T04:58:29Z",
"sourceFile": "StateSocialDistancingMeasures_cleaned.csv",
"fetchInclude": "[this,versionEdits]",
"fetchType": "Policy"
},
"version": 3,
"lastSavedTimestamp": "2020-05-05T04:58:29Z",
"numSavedVersions": 1,
"savedVersion": 1
}
]
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
this | object Container of query evaluation attributes | ||
|
OK. The request has succeeded.
LocationPolicySummary | object A |
... | object More |
{- "this": {
- "id": "string"
}
}
[- {
- "LocationPolicySummary": {
- "location": { },
- "versionDate": "string",
- "easingOrder": "string",
- "stayAtHome": null,
- "...": "string"
}, - "...": { }
}
]
PolicyDetail stores country-level policy responses to COVID-19 including:
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
location | OutbreakLocation | C3.ai Type OutbreakLocation where the policy was enacted. |
startDate | datetime | Date on which a specific policy took effect. |
endDate | datetime | Date on which a specific policy ended. |
entryDate | datetime | Date on which a specific policy was recorded (only for World Bank data). |
policyType | string | Type, classification, or indicator of a policy. Allowed values for OxCGRT data: C1 -C8 , E1 -E4 , H1 -H5 . Allowed values for World Bank data: Banking sector , Financial Markets/NBFI , Insolvency , Liquidity/funding , Payments systems , Other . Allowed values for South Korea data: Heath , Social , Technology , Immigration , Transformation , Alert , Administrative , Education . |
policySubType | string | Sub-type or sub-classification of a policy, only applicable to World Bank data. Allowed values: Crisis management , Integrity , Operational continuity , Prudential , Support borrowers , Market functioning , NBFI , Public debt management , Asset purchases , Liquidity (incl FX)/ELA , Policy rate , Cash/Check usage restrictions , Consumer protection , Digital payments , Relaxation compliance . |
name | string | Name of the policy; examples are School closing and Testing policy . |
value | int | Value of a specific policy (only applicable to OxCGRT data). 0 = no restrictions; 1 = restrictions on very large gatherings (the limit is above 1000 people); 2 = restrictions on gatherings between 101-1000 people; 3 = restrictions on gatherings between 11-100 people; 4 = restrictions on gatherings of 10 people or less. |
flag | int | Whether the policy is targets at a specific region or applies to the whole country (only applicable to OxCGRT). 0 = targeted at specific geographical region; 1 = applies to the whole country. |
details | string | Additional details or notes respective to a specific policy. |
origin | string | Source of the policy data. Allowed values are World Bank Finance , South Korea , University of Oxford . |
HTTP URL:
https://api.c3.ai/covid/api/1/policydetail/fetch
Request JSON:
{
"spec" : {
"filter": "contains(lowerCase(name),'school closing') && value == 3 && origin == 'University of Oxford'",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-06-07T00:00:00Z",
"policyType": "C1",
"name": " School closing",
"value": 3,
"flag": 1,
"details": "[COVID-19: Despite 3-Month Extension of School Leave Remote Learning Continues Following the decision of the Emergency Committee to extend school closures for the next three months, the Afghan Ministry of Education (MoE) announced that remote education programmes will continue. The MoE in its statement said that the Committee’s decision to prevent the spread of the virus within schools, private institutes and public teacher training centres has been noted. The decision to start face-to-face training in schools would depend on the number of Coronavirus cases and whether they were declining within the community, they said. Remote learning will continue for the time being. Start Alternative options for educational services The MoE said that alternatives to formal education services, limited gatherings with health and preventive measures and online courses, would be formally launched soon.] https://web.archive.org/web/20200608190520/http://reporterly.net/live/newsfeed/sunday-june-7-2020/covid-19-despite-3-month-extension-of-school-leave-remote-learning-continues/",
"origin": "University of Oxford",
"id": "Afghanistan_00e495f4b1dce8012dc388df52858596",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-12T16:10:24Z",
"createdBy": "dataloader",
"updated": "2020-06-12T16:10:24Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-12T16:10:26Z",
"sourceFile": "OxCGRT_PolicyAll_latest.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-03-14T00:00:00Z",
"policyType": "C1",
"name": " School closing",
"value": 3,
"flag": 1,
"details": "On March 14, 2020, the Afghan government announced the closure of all schools and universities for a month. The academic year in most of the country beings on March 21st, but this postponed the commencement until mid-April. https://web.archive.org/web/20200402185825/http://www.afghanistantimes.af/afghanistan-shuts-schools-bans-public-events-amid-coronavirus-fears/",
"origin": "University of Oxford",
"id": "Afghanistan_08bb900a1c5cfdddf64ac643627c89ec",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-12T16:10:24Z",
"createdBy": "dataloader",
"updated": "2020-06-12T16:10:24Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-12T16:10:26Z",
"sourceFile": "OxCGRT_PolicyAll_latest.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-05-22T00:00:00Z",
"policyType": "C1",
"name": " School closing",
"value": 3,
"flag": 1,
"details": "\"UNICEF Afghanistan Representative, Dr. Aboubacar Kampo, told Pajhwok Afghan News in an exclusive interview that this is a global pandemic impacting several countries, and currently, some 450 million children are out of school across the South Asia region. Dr. Aboubacar Kampo said Covid-19 times in Afghanistan worsens the situation for children. Continued conflict and insecurity over the past four decades have impacted on development, resulting to lost livelihoods and increased poverty, especially amongst vulnerable families, with children being the most affected. He further added there were over 600,000 malnourished children in Afghanistan while over three million children were out of school across the country, even before Covid. Kampo added that UNICEF was supporting the Ministry of Education on alternative solutions to learning during the school closure and supporting the government to make sure handwashing facilities existed in schools when they do reopen. UNICEF Afghanistan Representative said the provision of sanitation and hygiene facilities would be supported for children both in schools and community-based education centres. He said it was not known when schools would reopen formally due to the evolving situation. “If it comes in winter season, then we need to get prepared the schools and the kids as well.” On the other hand, the Ministry of Education (MoE) says they have been working on alternative options for the education system in the country. Nooria Nehzat, spokeswoman for the MoE, told Pajhwok they conducted short term courses in the open sky where social distancing was also observed nation-wide. She said the MoE had signed a contract of 3,000 textbooks, videos materials with the education system of Turkey to keep alive the teaching process for primary students in the country. Meanwhile, Dr. Mirwais Balkhi, the minister of education, says they have been working on a comprehensive education plan which would be implemented in Kabul and in the rest of provinces in near future.\" https://web.archive.org/web/20200604235818/https://www.pajhwok.com/en/2020/05/06/covid-19-pandemic-shouldn%E2%80%99t-hamper-education-afghanistan-unicef",
"origin": "University of Oxford",
"id": "Afghanistan_17c877f89f6b0f34270499298244982a",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-06T15:26:45Z",
"createdBy": "dataloader",
"updated": "2020-06-06T15:26:45Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-06T15:26:46Z",
"sourceFile": "OxCGRT_PolicyAll_latest.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
...
],
"count": 711,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/policydetail/fetch
Request JSON:
{
"spec" : {
"filter": "contains(policyType, 'Banking Sector') && contains(policySubType, 'Prudential') && contains(lowerCase(origin), 'world bank')" ,
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-04-09T00:00:00",
"entryDate": "2020-04-17T00:00:00",
"policyType": "Banking Sector",
"policySubType": "Prudential",
"details": "Increased frequency of Financial Stability Committee meetings and daily cashflow reports required from banks",
"origin": "World Bank Finance",
"id": "Afghanistan_697e31b366ea0b4e4e0dc6db1c83b668",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-09T03:04:17Z",
"createdBy": "dataloader",
"updated": "2020-06-09T03:04:17Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-09T03:04:43Z",
"sourceFile": "covid-fci-data.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-04-09T00:00:00",
"entryDate": "2020-04-17T00:00:00",
"policyType": "Banking Sector",
"policySubType": "Prudential",
"details": "Relaxation of provisioning requirements for loans that are covered by partial credit guarantees",
"origin": "World Bank Finance",
"id": "Afghanistan_6c6650eec8ec6bc01d427d9d8634b378",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-09T03:04:17Z",
"createdBy": "dataloader",
"updated": "2020-06-09T03:04:17Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-09T03:04:43Z",
"sourceFile": "covid-fci-data.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-04-09T00:00:00",
"entryDate": "2020-04-17T00:00:00",
"policyType": "Banking Sector",
"policySubType": "Prudential",
"details": "Suspension of on-site examinations Until June 2020. On-site spot checks will be done as needed",
"origin": "World Bank Finance",
"id": "Afghanistan_77f802230be3a22e36482a2fa7f2caa4",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-09T03:04:17Z",
"createdBy": "dataloader",
"updated": "2020-06-09T03:04:17Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-09T03:04:43Z",
"sourceFile": "covid-fci-data.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-04-09T00:00:00",
"entryDate": "2020-04-17T00:00:00",
"policyType": "Banking Sector",
"policySubType": "Prudential",
"details": "Flexibility in application of supervision rules: loan classifications frozen as of February 29 2020 until June; \nextension of overdraft debt due between March-June until October; suspension of supervisory and adminstrative fees and penalties.",
"origin": "World Bank Finance",
"id": "Afghanistan_7a41786ee68aa9b3ddbd03cf17095ec7",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-09T03:04:17Z",
"createdBy": "dataloader",
"updated": "2020-06-09T03:04:17Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-09T03:04:43Z",
"sourceFile": "covid-fci-data.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
{
"location": {
"id": "Afghanistan"
},
"startDate": "2020-04-09T00:00:00",
"entryDate": "2020-04-17T00:00:00",
"policyType": "Banking Sector",
"policySubType": "Prudential",
"details": "IFRS 9 implementation date has been extended to June 2021",
"origin": "World Bank Finance",
"id": "Afghanistan_c3e88cb81ae2fc99d791017da47a25d3",
"meta": {
"tenantTagId": 4,
"tenant": "covid",
"tag": "prod",
"created": "2020-06-09T03:04:17Z",
"createdBy": "dataloader",
"updated": "2020-06-09T03:04:17Z",
"updatedBy": "dataloader",
"timestamp": "2020-06-09T03:04:43Z",
"sourceFile": "covid-fci-data.csv",
"fetchInclude": "[]",
"fetchType": "PolicyDetail"
},
"version": 1
},
...
],
"count": 664,
"hasMore": false
}
HTTP URL:
https://api.c3.ai/covid/api/1/policydetail/fetch
Request JSON:
{
"spec" : {
"filter": "contains(policyType, 'Health') && contains(lowerCase(origin), 'korea')",
"limit": -1
}
}
Response JSON:
{
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
SurveyData stores COVID-19-related public opinion, demographic, and symptom prevalence data collected from COVID-19 survey responses.
NOTE: If the field is not present in a returned object, then that field will not be returned.
Field | Data type | Description |
---|---|---|
id | string | Unique ID of the response. |
location | OutbreakLocation | C3.ai Type OutbreakLocation (state-level) affiliated with this survey response, based on the 3-digit zip code the participant provides. |
zipcodePrefix | double | Participant's self-reported 3-digit zip code. |
annualHouseholdIncome | double | Participant's response to the question: What is your approximate annual household income in dollars? |
birthYear2020 | int | Participant's response to the question: What is your year of birth? |
coronavirusConcern | double | Participant's response to the question: On a scale from 0 to 10, how concerned are you about the coronavirus? (0 : Not at All, 5 : Somewhat, 10 : Extremely Concerned) |
coronavirusEmployment | string | Participant's response to the question: How has your employment status changed since January 1, 2020? The value of this field is a comma-separated string consisting one or more of the following choices: was-full : I was employed full-time on January 1, 2020.was-part : I was employed part-time on January 1, 2020.was-jobless : I was unemployed on January 1, 2020.now-full : I am now employed full-time. now-part : I am now employed part-time.now-jobless : I am now unemployed.now-retired : I am now retired.was-retired : I was retired on January 1, 2020.was-disabled : I was disabled and unable to work on January 1, 2020.now-disabled : I am now disabled and unable to work. |
coronavirusIntent_Mask | double | Participant's response to the question: On a scale from 0 to 100, because of Coronavirus, do you intend to wear a face mask in public? (0 : No, 50 : Possibly / Unsure, 100 : Yes) |
coronavirusIntent_SixFeet | double | Participant's response to the question: On a scale from 0 to 100, are you trying to stay 6 feet away from other people, because of Coronavirus? (0 : No, 50 : Possibly / Unsure, 100 : Yes) |
coronavirusIntent_StayHome | double | Participant's response to the question: On a scale from 0 to 100, do you intend to stay at home as much as possible right now, because of Coronavirus? (0 : No, 50 : Possibly / Unsure, 100 : Yes) |
coronavirusIntent_WashHands | double | Participant's response to the question: On a scale from 0 to 100, do you intend to wash your hands more than usual, for at least 20 seconds each time? (0 : No, 50 : Possibly / Unsure, 100 : Yes) |
coronavirusLocalCommunity | double | Participant's response to the question: Do you know anyone in your local community who has contracted Coronavirus? If so, how many people? Please enter “0” if none. |
coronavirusSupportSystem | string | Participant's response to the question: If you need help in the next 6 months because of the COVID-19 pandemic, who do you think is most likely to help you? The value of this field is a comma-separated string consisting one or more of the following choices: fam-friend : Family and friends,employer : Employer,religious : Religious community,local-gov : Local government,state-gov : State government,fedgov : Federal government,other : Other,no-one : No one,local-community : Local community groups,private-org : A private organization. |
coronavirusSymptoms | string | Participant's response to the question: Are you personally experiencing any of the following symptoms? The value of this field is a comma-separated string consisting one or more of the following choices: dry-cough : Dry cough,short-breath : Shortness of breath,diarrhea : Diarrhea,muscle-ache : Muscle ache,fatigue : Fatigue,nasal : Runny nose or nasal congestion,sore-throat : Sore throat,lost-smell-taste : Loss of smell / taste,fever : Fever,headache : Headache,nausea-vomit : Nausea and/or vomiting,none : None. |
ratioOfAdultHospitalization | string | Participant's response to the question: What proportion of 35 year olds who get Coronavirus will require hospitalization? Allowed values: one-in-30k , one-in-1k , three-in-ten , three-percent , thirty-percent , almost-all . |
coronavirusWhenShouldReopen | string | Participant's response to the question: From your understanding, roughly how long should it be before restrictions on normal in-person activities are lifted in your area? Allowed values: immediate , few-days , 1-wk , 2-wk ,3-wk ,1-mo ,2-mo ,3-mo ,4-mo ,5-mo ,6-mo ,1-yr ,yr-plus . |
hasCoronavirusBelief | double | Participant's response to the question: On a scale from 0 to 10, do you believe you currently have Coronavirus? (0 : Definitely No, 5 : Unlikely but Possible, 10 : Yes) |
coronaSimilarFlu | boolean | Whether the participant agrees with the statement: Coronavirus is similar to the flu: it does not kill people unless they’re old or already sick. |
coronaOnlyElderly | boolean | Whether the participant agrees with the statement: Young people cannot contract Coronavirus, only older people can. |
youngInvulnerable | boolean | Whether the participant agrees with the statement: Young, healthy people can contract Coronavirus but cannot be harmed by it. |
elderlyMoreRisk | boolean | Whether the participant agrees with the statement: People of all ages can contract Coronavirus, but older people are more vulnerable to becoming severely ill. |
coronaAllHospitalize | boolean | Whether the participant agrees with the statement: Coronavirus can require hospitalization for people of any age, even those who were otherwise healthy. |
coronaKillsMost | boolean | Whether the participant agrees with the statement: Coronavirus will kill most people who contract it. |
ethnicitySpreadsCovid | boolean | Whether the participant agrees with the statement: It is much more likely to get Coronavirus from people of some ethnicities than others. |
allSpreadCovid | boolean | Whether the participant agrees with the statement: People of any background are equally at risk of spreading Coronavirus. |
nonNativesSpreadCovid | boolean | Whether the participant agrees with the statement: People who were born overseas are more likely to spread Coronavirus. |
asymptomaticSpread | boolean | Whether the participant agrees with the statement: People can be infected with Coronavirus and feel fine but still spread it to others. |
onlySickSpread | boolean | Whether the participant agrees with the statement: People who get sick from Coronavirus can spread it to others, but those who feel fine cannot. |
infectFromAnimal | boolean | Whether the participant agrees with the statement: People who contract Coronavirus generally get it from infected animals and animal products. |
politicalBelief | double | Participant's response to the question: On a scale from very liberal to very conservative, how would you best describe your political views? (0 : Very Liberal, 5 : Moderate, 10 : Very Conservative) |
politicalParty | double | Participant's response to the question: On a scale from 0 to 10, in terms of politics, do you consider yourself a Democrat, independent, or Republican? (0 : Strongly Democrat, 5 : Independent, 10 : Strongly Republican) |
trumpApproval | double | Participant's response to the question: On a scale from 0 to 10, do you approve or disapprove of the way Donald Trump is handling his job as President? (0 : Strongly Disapprove, 5 : Neither Approve nor Disapprove, 10 : Strongly Approve) |
religiosity | double | Participant's response to the question: On a scale from 0 to 10, how important would you say religion is in your life? (0 : Not Very Important, 5 : Somewhat Important, 10 : Very Important) |
religion | string | Participant's self-reported religious belief. Allowed values: evangelical-protestant : Evangelical Protestant,other-protestant : Other Protestant,catholic : Catholic,mormon : Mormon,orthodox : Orthodox,jewish : Jewish,muslim : Muslim,buddhist : Buddhist,hindu : Hindu,atheist : Atheist,agnostic : Agnostic,something-else : Something Else,nothing-in-particular : Nothing in Particular. |
education | string | Participant's self-reported education background. Allowed values: school : Some School / No Diploma,highschool : High School Graduate,some-college : Some College,college : College Degree,postgrad : Postgraduate Degree. |
ethnicity | string | Participant's self-reported ethnicity. Allowed values: asian : Asian,black : Black,hispanic-latino : Hispanic or Latino,white : White,other-mixed : Other/Mixed. |
gender | string | Participant's self-reported gender. Allowed values: female , male , other . |
startTime | datetime | Start time of the survey. |
The following example shows how to use this API.
HTTP URL:
https://api.c3.ai/covid/api/1/surveydata/fetch
Request JSON:
{
"spec": {
"filter": "location == 'California_UnitedStates' && coronavirusIntent_Mask >= 75",
"include": "coronavirusEmployment",
"limit": -1
}
}
Response JSON:
{
"objs": [
{
"id": "0014fa29afed18b4c3533df6d3fe3893",
"coronavirusEmployment": "was-jobless, now-jobless",
"meta": {
"fetchInclude": "[coronavirusEmployment,id,version]",
"fetchType": "SurveyData"
},
"version": 1
},
{
"id": "003e154ae15ee3b01b61b712fbc294d5",
"coronavirusEmployment": "was-part",
"meta": {
"fetchInclude": "[coronavirusEmployment,id,version]",
"fetchType": "SurveyData"
},
"version": 1
},
{
"id": "00b47a4ea2fab1b5ff469085e804f2db",
"coronavirusEmployment": "now-jobless",
"meta": {
"fetchInclude": "[coronavirusEmployment,id,version]",
"fetchType": "SurveyData"
},
"version": 1
},
...
],
"count": 2025,
"hasMore": false
}
Content-Type required | string Set this to application/json. |
Accept required | string Set this to application/json. |
spec | object Container of query evaluation attributes | ||||||||
|
OK. The request has succeeded.
objs | object Container of query evaluation attributes |
count | integer <int32> (The Count Schema) Number of rows returned. |
hasMore | boolean (The Hasmore Schema) If set to true there were more objs that were not returned. |
{- "spec": {
- "filter": "string",
- "include": "string",
- "limit": 0,
- "offset": 0
}
}
{- "objs": {
- "type": "string",
- "location": { },
- "name": "string",
- "id": "string",
- "version": "string",
- "meta": { },
- "typeIdent": "string"
}, - "count": 0,
- "hasMore": true
}
I acknowledge that my access to and use of the website is subject to the Privacy Policy, Terms of Use, and Data Use Conditions. The website is provided for educational and academic research purposes related to COVID-19.
Any publication or research results derived from the data must credit the C3.ai COVID-19 Data Lake as the source of the data.